Gene Paes_1381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1381 
Symbol 
ID6460484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1502839 
End bp1503384 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content49% 
IMG OID642725366 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_002016049 
Protein GI194334189 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGAT TTTCCAAGCT TAACGGTGAT GAAATGGGCC GTTTGGGCGT TGAAGAATAC 
AACGCTGCTG AAAAGCACCC GGTGACGATT ATTCTTCACA ATATCCGGAG CATGTATAAT
GTCGGTTCAA TTTTCAGGAC GGCTGATGCG GCAGGGATAG AGAAAGTGAT CATCACCGGT
TATACGGCGA CTCCACCGCG CAAGGAGATC GATAAGACGG CTCTGGGTGC TCAGGAGACA
ATGGCGTGGG AGTATTTTGC GCATCCTCTG GAGGTGATTC CTGCTATGAA GGAGAAGGGG
ATTGCCATAT GCGGGCTTGA GATAACGACG AACAGTCGCG CGTATACCGA TGTGGACCGG
AGTGATTTTC CGCTGTGCCT GATTCTGGGG AACGAAGTTC AGGGAATTGA TGACGATATA
CTCGAGCAGT GTGATCATAT TCTTGAAATC CCGCAGTTCG GCACAAAGCA TTCATTGAAT
GTTTCGGTTG CAGCAGGGGT GGCTTTATTT GAAATGGTTA GAACTTTCCG GCAGGGCCTT
TGTTGA
 
Protein sequence
MKGFSKLNGD EMGRLGVEEY NAAEKHPVTI ILHNIRSMYN VGSIFRTADA AGIEKVIITG 
YTATPPRKEI DKTALGAQET MAWEYFAHPL EVIPAMKEKG IAICGLEITT NSRAYTDVDR
SDFPLCLILG NEVQGIDDDI LEQCDHILEI PQFGTKHSLN VSVAAGVALF EMVRTFRQGL
C