Gene Paes_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1380 
Symbol 
ID6458459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1502001 
End bp1502807 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content47% 
IMG OID642725365 
Productalpha/beta hydrolase fold 
Protein accessionYP_002016048 
Protein GI194334188 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCATT ACAGAATTCA CGAATTGGCA GAAGATGCCC CATGGGTTGT CTTTGTTCAT 
GGAGCGGGTG GCAGCTCTTC TATCTGGTTT TTGCAGGTCA AGGATTTCAG CAGGAATTTC
AATGTTCTGA TGGTTGATCT GCGTGGCCAC GGCAAATCCT CCTCTCTTCA TCATAAGGGT
CAGTATAATT TTGAGGACAT TACCCTTGAT ATTCTGGAGG TTCTGGATCA TCTCAAGATA
GATCGCGCGC ATTTTATCGG GATTTCTCTC GGGACGATTC TGATACGACA GCTCGGAGAG
CTCGCCCCTG AGCGGGTTTG TTCGATGGTT ATGGGTGGCG CTATTATCCG GCTCAATGTG
AGGGCTAAAG TGCTTGTTGC GGTTGGCAAT ATGTTTAAGC GGTTTATCCC CTACATGTGG
CTCTACAGCT TTTTTGCCTG GATCATCATG CCTCGTGCCA GGCATAAAAA GTCAAGGACC
CTGTTTGTCA ACGAGGCGAA AAAAATCGCA CAGAAGGAGT TTATGCGCTG GTTTACACTG
ACCTATGAGC TTAATCCGCT TCTGCGCTAT TTCGAGGAGA AAGATACCGC TATTCCTACC
CTCTATCTCA TGGGGGAGGA GGATTATATG TTTCTTCCTC CTGTGGAATA TATCGTTACC
CGACATAGCA ATTCGTATCT GGAAGTGATT GCGAATTCAG GTCATGTCTG TAATGTCGAT
CAGCCTCAGG ATTTCAACGA GCGCGCTATC CGGTTCATGC AGCTCCATTC CTTCTCTTCG
CCTGTTCTGC AGGCTTCTGC TGTATAG
 
Protein sequence
MLHYRIHELA EDAPWVVFVH GAGGSSSIWF LQVKDFSRNF NVLMVDLRGH GKSSSLHHKG 
QYNFEDITLD ILEVLDHLKI DRAHFIGISL GTILIRQLGE LAPERVCSMV MGGAIIRLNV
RAKVLVAVGN MFKRFIPYMW LYSFFAWIIM PRARHKKSRT LFVNEAKKIA QKEFMRWFTL
TYELNPLLRY FEEKDTAIPT LYLMGEEDYM FLPPVEYIVT RHSNSYLEVI ANSGHVCNVD
QPQDFNERAI RFMQLHSFSS PVLQASAV