| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1378 |
|---|
| Symbol | hppA |
|---|
| ID | 6460542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 1499065 |
|---|
| End bp | 1501221 |
|---|
| Gene Length | 2157 bp |
|---|
| Protein Length | 718 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642725363 |
|---|
| Product | membrane-bound proton-translocating pyrophosphatase |
|---|
| Protein accession | YP_002016046 |
|---|
| Protein GI | 194334186 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3808] Inorganic pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAGCG CCAACGCGCG TTCAGCAGAA CAGTTCTGGT TAGTTCGAAA TTCAAGCAAT
TCTAACGCAA AAGTTCATAT GGACAACCAA CAGATTATTT TGTACGCAGT TCCTCTCTCC
GGTGTTCTTG CATTACTGTA TGCCCTCTTC AAAGCCTCGT GGGTATCAAA ACAGGATGCC
GGAACCGAAC AGATGGTCGT TATTGCCGGC CATATTGCTG ACGGAGCCGT AGCATTCCTG
AAAAGAGAGT ATAAAATTCT TGCCATTTTT GTCCTTTCCG TTGCCGTCCT TCTGGGCTTC
GTCAACAGCG GTCGCCCTGA TTCCTCCCCG CTCATCTCCC TCAGTTTCAT TATCGGAGCC
ATCTGCTCCG GACTTGCAGG CTACTTCGGC ATGAAGGTTG CCACGAAGGC GAATGTCAGA
ACAACAAATG CAGCAAGAAC CGGACTGAGC AGCGCGCTGA ACGTTGCATT TTCCGGCGGA
CTTGTCATGG GACTCTCCGT TGTCGGACTT GGAGTTCTCG GCCTCTCAAG CCTTTTCATC
ATCTATTCAA ACCAGTTCAG TGACATCGGT CAGGTGATCA ACGTCATTTC CGGCTTCTCG
CTTGGCGCCT CATCAATCGC CCTTTTTGCG CGCGTTGGAG GAGGCATCTA CACAAAAGCC
GCTGACGTAG GCGCTGACCT GGCAGGCAAA GTCTACGAAG GCATTCCTGA AGATGACCCC
AGAAACCCTG CAACCATTGC CGACAACGTT GGTGACAACG TCGGTGACGT CGCTGGTATG
GGCGCTGACC TCTTTGAAAG TTATGTCGGT GCAATCATCG GTACAATGGT CCTGGGCGCA
GCATTTCTTC CCGTCTTCAA CGAAATGGGA ATCAATCCTA TCGCCGGTGT TATTCTCCCA
CTGCTTCTTG CTGCTGTCGG TATCGTTGTC TCCATTTTCG GATCGTTCTT CGTCAAAGTC
AAAGAAGGCG GCAACCCTCA GACAGGACTC AACACCGGAG AATTCGGCGC GACATTTATC
ATGGCGGTCC TCAGCTATTT CATCATCTCC TATACGCTTC CTGCAAGCTG GATCGTCGGT
GATACGACCT ACACTGCGCT GAATGTCTTC TTTGCCGTTC TTACCGGACT TGCTACAGGA
GTACTCATCG GTCTGATCAC GGAATACTAC TGCTCGACAC ACAACAAGCC TGTCGTCAAC
ATCGCCTACC AGAGCGTCAC TGGTGCGGCA ACAAACATCA TTGCAGGTCT CGGAACAGGT
ATGATGTCTA CCGGTCTGCC GATCATTGTC CTGTCAGCAG CCATTATTCT CTCCTTCAAT
TTCGCTGGTC TCTACGGTAT CGCCATCGCG GCATTCGGTA TGCTTTCCGT CACCGGCATT
CAGCTCGCTG TTGACGCCTA CGGCCCGATT TCAGATAACG CAGGCGGTAT CGCAGAAATG
GCAGGACTGC CGAAAGAGGT TCGAGAAAGA ACCGATAAGC TTGATGCTGT CGGCAACACG
ACCGCTGCAA TCGGTAAGGG ATTTGCCATT GGCAGTGCCG CACTGACCGC GCTTGCGCTT
TTTGCGGCAT TCCGTCAGCA GGCAGGCATT ACATCCATCG ACATCTCTGA ACCGGTCATT
ATGGCTGGAC TGCTGCTCGG TGCTATGCTG CCGTTTGTCT TCAGCGCACT GGCGATGGAC
GCAGTCGGAA GAGCCGCGAG AGATATGATC ACCGAAGTCG GCCGTCAGTT CAATGAAATT
CCCGGTCTGC GCGAAGGAAC CGCTCCTGCC GAATTTGCCC ACTGTGTCGA CATTTCGACA
AAAGCGGCAT TGAGGGAGAT GATCCTGCCG GGATTGCTGG GTATTCTGGT CCCTGTCGTC
GTCGGGTTCA CCTCAAAAGA CATGCTTGGC GGCCTGCTTG CAGGCGTCAC CTCTTCAGGT
GTTCTGATGG CCATCTTCCA GTCCAACGCT GGTGGCGCAT GGGATAATGC GAAAAAACGA
ATTGAGGGCG GCATTGAATT CGACGGCGTT CTCTACGGCA AAGGCACAGA AGCTCATAAA
GCAGCTGTTG TCGGTGATAC CGTTGGTGAC CCGTTCAAGG ATACCAGCGG CCCAAGCCTG
AACATTCTCA TGAAGCTTAT CGCTGTTGTC GCACTGGTTA TCGCTCCGCT GATCTGA
|
|---|
| Protein sequence | MVSANARSAE QFWLVRNSSN SNAKVHMDNQ QIILYAVPLS GVLALLYALF KASWVSKQDA
GTEQMVVIAG HIADGAVAFL KREYKILAIF VLSVAVLLGF VNSGRPDSSP LISLSFIIGA
ICSGLAGYFG MKVATKANVR TTNAARTGLS SALNVAFSGG LVMGLSVVGL GVLGLSSLFI
IYSNQFSDIG QVINVISGFS LGASSIALFA RVGGGIYTKA ADVGADLAGK VYEGIPEDDP
RNPATIADNV GDNVGDVAGM GADLFESYVG AIIGTMVLGA AFLPVFNEMG INPIAGVILP
LLLAAVGIVV SIFGSFFVKV KEGGNPQTGL NTGEFGATFI MAVLSYFIIS YTLPASWIVG
DTTYTALNVF FAVLTGLATG VLIGLITEYY CSTHNKPVVN IAYQSVTGAA TNIIAGLGTG
MMSTGLPIIV LSAAIILSFN FAGLYGIAIA AFGMLSVTGI QLAVDAYGPI SDNAGGIAEM
AGLPKEVRER TDKLDAVGNT TAAIGKGFAI GSAALTALAL FAAFRQQAGI TSIDISEPVI
MAGLLLGAML PFVFSALAMD AVGRAARDMI TEVGRQFNEI PGLREGTAPA EFAHCVDIST
KAALREMILP GLLGILVPVV VGFTSKDMLG GLLAGVTSSG VLMAIFQSNA GGAWDNAKKR
IEGGIEFDGV LYGKGTEAHK AAVVGDTVGD PFKDTSGPSL NILMKLIAVV ALVIAPLI
|
|---|
| |