Gene Paes_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1375 
Symbol 
ID6460497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1496497 
End bp1497204 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content47% 
IMG OID642725360 
Productphosphoribosylaminoimidazole-succinocarboxamide synthase 
Protein accessionYP_002016043 
Protein GI194334183 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 
TIGRFAM ID[TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.492259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAG TGTCACTTCT TCACGAAGGA AAGGCCAAAA AGGTGTTTCT GACCGATAAC 
AGCGATCTTG TTATACAGGA ATTCAAAGAT GATGCGACAG CCTTCAATGC GAAGAAAAAA
GGTTCCATTC AGAACAAGGG CGTCGTCAAT AATGCGATTT CGTGTACCTT GTTTACCTTT
CTTGGCGAGA ATGGCATTCC AACGCACTAT GTCGAGCAGC TCTCCGATCG CGATATGCTC
TGCAAGCATC TCGACATTAT CAAAGTCGAG GTTGTCGTCC GCAATGTTGC GGCAGGTTCT
CTTGTCCGTC GCTATGGGTT CAAGGAGGGC TTCGTCCTTG AAACCCCTAT CATCGAACTC
TATCTCAAAG ACGACGATCT CGATGATCCG CTTATGAACG AAAGCCATGC TGTTGCCCTT
GGTCTTGCTT CCTATGAAGA ACTTGACCGT CTTAAAGAAC TTGCGGCTGC AATCAACACG
CTTCTCCGCT CCTTTTTTGC TGATCGCAAA CTTAATCTGG TTGATTTTAA ACTTGAGTTC
GGCCGTCACA ACGGAACCAT TCTTCTTGGC GATGAGATAA GCCCGGATAC CTGTCGTTTC
TGGGACCTCG ATTCCGGAGA GAAGATGGAT AAAGACCGTT TCCGGTTCGA TATGGGCGGC
GTTGAAGATG CTTATTCTGA AGTGCAGCGC CGGGTTCTGG AACTTTAA
 
Protein sequence
MNKVSLLHEG KAKKVFLTDN SDLVIQEFKD DATAFNAKKK GSIQNKGVVN NAISCTLFTF 
LGENGIPTHY VEQLSDRDML CKHLDIIKVE VVVRNVAAGS LVRRYGFKEG FVLETPIIEL
YLKDDDLDDP LMNESHAVAL GLASYEELDR LKELAAAINT LLRSFFADRK LNLVDFKLEF
GRHNGTILLG DEISPDTCRF WDLDSGEKMD KDRFRFDMGG VEDAYSEVQR RVLEL