Gene Paes_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1362 
Symbol 
ID6460567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1483858 
End bp1484631 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content51% 
IMG OID642725345 
Productfatty acid hydroxylase 
Protein accessionYP_002016030 
Protein GI194334170 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000314622 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.441838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGT TGCAACTCAC GTCATATATA ACCATCATCG CACTGGCGAT TGTTTTCTGG 
ATTGCAGAAG GAGTGGTGCC GTTTTTCAGA GGCCGTACAC AGCGAGCCAG GCATGCCTCG
GCAAACCTTT CACTCGCCGG CATGAATCTC ATGATACTGC TGCCTTCGGG GCTCTTCATG
GCCTTCATTC TTCATGAAGC AAAGATGTGG TGGCCAGGGC TCAGGGGAAC GGACCTCCCC
TATGCGCTGC AGACCGTCCT TATCCTTCTT TCGATCGATC TGTGGATGTA TATCTGGCAC
CGGATAAACC ACGAGATCGA TTTTCTATGG CGGTTTCATG CGGTTCATCA CAGCGACCCG
GCGCTGGACG TCACAAGCGC ATGGCGGTTT CACATCGTTG AGATCACTTT TTCAGAATTG
CTCCGCTATC CGGTCCTGAT CTTTATAGGT GCTGAAATTC AAGACCTGCT CCTCTACTCG
CTCATCATGA CACCGATTAT AGAATTTCAT CACAGTAATA TTTCGATTCC GGCAGCGCTT
GACCGGACGC TTCGCCTCGT CATCCCTACC CCCCTCATGC ACAGAATTCA TCACTCTGTT
ATCAGAACAG AGCACGACTC CAATTACGGC AGCATGCTTT CCATCTGGGA CCGAATCTTC
AACAGCTTCA AGCTGAAAGA AGATATCTCT GCCATGCCAC TGGGGCTCAT CAAAGAAAGC
GCCCCCGATC AGCAGACAAT AAAAGCACTG CTGACAAGAC CCTTCCGTCT CTGA
 
Protein sequence
MDTLQLTSYI TIIALAIVFW IAEGVVPFFR GRTQRARHAS ANLSLAGMNL MILLPSGLFM 
AFILHEAKMW WPGLRGTDLP YALQTVLILL SIDLWMYIWH RINHEIDFLW RFHAVHHSDP
ALDVTSAWRF HIVEITFSEL LRYPVLIFIG AEIQDLLLYS LIMTPIIEFH HSNISIPAAL
DRTLRLVIPT PLMHRIHHSV IRTEHDSNYG SMLSIWDRIF NSFKLKEDIS AMPLGLIKES
APDQQTIKAL LTRPFRL