| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1356 |
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| Symbol | |
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| ID | 6460402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1476715 |
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| End bp | 1478643 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642725340 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002016025 |
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| Protein GI | 194334165 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000107731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0276756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCAA AAAAACAACA TCTCGAACAG CTTCTCAAAG CACTGGAACA GCTAACGATC
GGGGAATGTC ACGAAAGCTA TCACGTCCCC CGTCTCTGGC AGGAAACAGC AAAAGGCCAG
CACACGGTCA ATCCCGCACG TTACTACCAC GACATCATCA GTCGTCTTGT CAATAGCCCT
GAGCTTCCTT TTGACAACAG CGGTGCCCCG GCCGATGAGT GGAGCAGGAG TGCCATCGTC
TATAACTTAT TCCCTCGCCT GACGACAGCA TTCGATCATG ATAACAACAA TATCATCTCT
GCCGATCCCA TGGCCAGCGG GTTTCGTGAA ACAGGCACCT TACTGAAATC CATCGCCCTG
CTGCCCTACA TCAAGCAATT GGGTGTCAAT ACGCTCTATC TCCTGCCGGT AACAGAACCC
GGCTATTATG GAAAAAAAGG CGCACTCGGT TCACCGTATG CCATAAAAAA CCCATTTATC
ATCGATCCAC TGCTTTCTGA ACCAGTCCTC GGGCTTAGAG CAGAGATTGA ACTTCAAGCT
TTTGTCGAAG CAGCGCACCA TCTCGGCATG AGAGTCGTTC TGGAGTACGT ATTCAGGACC
GCATCTGTCG ATAGCGACTG GATCTCAACC CACCCGGACT GGTTCTACTG GCTGAAGGGC
AACAGTGAAG AAAACCAACA GTTCGGCCCC CCCCGTTTCG AGCACGACAC GCTCACAAGA
ATCTACGAAC AGGTCGATAA ACATGAATTC GACCATCTGC CGGCCCCGTC AGAAGAGTAC
CGCAATCAGT TTTCTGAAGC GCCGCTCACC ACAAGGCTCA ATCCTGACGG AAGCATGACC
GGCATAGCCG CTGACGGAAA AGAGTGTCGT ATAGCCAGCG CATTTTCCGA CTGGCCTCCG
GATGACAGTC AGCCGCCGTG GACGGATGTG ACCTACCTGA AAATGCACAG GGACAGCTCG
TTCAACTATA TGGCTTACAA TACAATACGT ATGTACGACG CGGCTCTTGA CCGACCGGAA
GTCATCAATA ATGAGCTCTG GTCATCCCTG GAAAGCATCA TTCCTTTCTA TCAGAGCACG
TTCAGCATAG ACGGCGCCAT GATCGACATG GGCCATGCCC TGCCTTCTGC ACTCAAGGCA
GCTATTGTAG AGAAAGCCCG GCAACAGAAT TCTGACTTTG CTTTCTGGGA TGAAAATTTC
GATCCCTCTT CATCGGTTAA AGAAGAAGGC TTCAACGCGG TCTTCGGCTC GTTGCCCTTT
GTCATCCAGG ACCCGATTTA CATACGAGGA CTGCTGAACT TTCTCAATAA AACAGGTTCT
GCCATTCCCT TCTTCGCTAC AGGAGAAAAT CACAATACCC CGCGGCTCTG CCACAACCAC
CCGCGCCAGG AAACCGGAAG AAACCGTTCA CGTTTTATTT TTGCGCTCGG CATCATGCTG
CCGGCGCTGC CGTTCATTCA TTCAGGAATG GAACTGTGTG AATGGCATCC GGTCAACCTC
GGCCTGAACT TCAGCGATGA AGACCGCAGA AATTTTCCGT CTGAAACCCT GCCGCTCTTC
AGCACGGGAA GTTATGACTG GAGCAGAACA AACGACCTGG AGCCGCTGAA CGCTTTTATC
TCGAAATTGC TTGTAATCAG GCGGCGCTAT CATGATATTA TAAGCAGCGG AGAGAAAGGT
TCGCTGATCG TACCGTTCGT AACCGGACCG GAAATTCTTG CAGTCATGCG TAAGGGCGAA
GGGCACAATC TGCTCTTCAT CGGAAACAGC AACCCGCAAG AGCACTCATC GGGCACCATG
GAATTCAAAA ACAGTCATTT CACCCTCACT GATCTGATCG GAGGACAAAC GCTGAGAGTA
GCGGATCACA AGCTGCATCT TGAACTGCAG CCAGGTGAAT GCCTGATCGT AGAGCTGACC
GCAGAATGA
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| Protein sequence | MSPKKQHLEQ LLKALEQLTI GECHESYHVP RLWQETAKGQ HTVNPARYYH DIISRLVNSP
ELPFDNSGAP ADEWSRSAIV YNLFPRLTTA FDHDNNNIIS ADPMASGFRE TGTLLKSIAL
LPYIKQLGVN TLYLLPVTEP GYYGKKGALG SPYAIKNPFI IDPLLSEPVL GLRAEIELQA
FVEAAHHLGM RVVLEYVFRT ASVDSDWIST HPDWFYWLKG NSEENQQFGP PRFEHDTLTR
IYEQVDKHEF DHLPAPSEEY RNQFSEAPLT TRLNPDGSMT GIAADGKECR IASAFSDWPP
DDSQPPWTDV TYLKMHRDSS FNYMAYNTIR MYDAALDRPE VINNELWSSL ESIIPFYQST
FSIDGAMIDM GHALPSALKA AIVEKARQQN SDFAFWDENF DPSSSVKEEG FNAVFGSLPF
VIQDPIYIRG LLNFLNKTGS AIPFFATGEN HNTPRLCHNH PRQETGRNRS RFIFALGIML
PALPFIHSGM ELCEWHPVNL GLNFSDEDRR NFPSETLPLF STGSYDWSRT NDLEPLNAFI
SKLLVIRRRY HDIISSGEKG SLIVPFVTGP EILAVMRKGE GHNLLFIGNS NPQEHSSGTM
EFKNSHFTLT DLIGGQTLRV ADHKLHLELQ PGECLIVELT AE
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