| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1354 |
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| Symbol | |
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| ID | 6458720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1473636 |
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| End bp | 1475621 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642725338 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002016023 |
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| Protein GI | 194334163 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.828484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0280405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAC GAACTTCTTT TTCAGCACTT ACACTCTTAT TCTGCCTGCT GATTGCGACA
ATGCTGCAGC CAGGAAGGGC GTATGCAGCC CGTTCTCAGG ATGATCAGGC TGTTGCGGCT
GTACTGGACA GCCTGGTTGC TGCGACTTAT TTTGATGATA GTCATTTCCG GCAATGGAAA
GATGATGTGC CGAATGGCTT TTCTCCGACC TTTATTCCCC AGTTCGATGA TGAGACATAT
GCAGAAAGGA TAGCTGAACT CAACCGCAGA ACGCCCATAA GACTGACCTA CAACGAGCAT
GTAAAAAATT TTATAAAATT GTATGCCGTT GACAAACGGG TGATGACAGC AAAGATTCTT
GGTTTGACCA AAACCTATTT TCCCCTTTTT GAGCAAAAGC TGCGCGAATA CAATATGCCT
ACCGAGCTGA AATATCTTGC CATTGTCGAA TCGGCACTCA ACCCTGTTGC GGTATCGAGT
GCCAATGCAA AAGGGCTGTG GCAGTTTATT TACGGTACAG GCAAAATGTA TGGTTTGAAG
TCCACCTCAT TTGTCGAGGA TCGATTTGAT CCCTATAAGG CGACTGTTGC CGCGTGTGAA
CACATGACGG ATCTGTATGA TATCTATGGC GACTGGTTTC TTGTGCTCGC GGCATACAAT
GCCGGTGCCG GTAACGTCAA TAAGGCTATC AGGCGATCAG GAGGACGGAG GGATTACTGG
GGGATATGGT CGAAGCTTCC TTCGGAGACA CGGAGTTATG TTCCGGCATT CATTGCGGTG
ACCTATGTGA TGAATTATTA CAAGGAACAC AATATCATTC CTGAAGAACC GGGGTATCTC
TATGAGAATA TCGCAACGGT CAATGTCTCT GATGTTCTGG CTTTTGACCA GATCCACGAA
GTGCTCGGTA TTCCTCTCCA GGACCTTGAG TTTCTCAACC CGCAGTACAA GCGGGGGGTT
ATTCCCGTTA TTGGCCCGGC ACCGCTTTCG CTGCGTCTTC CAGACCATTA TGTGGATGAT
TTTAATCGTA AGGAAAAAGA GCTTTACGTG CATAAATCAC AATCAGGGAT TGACCGCGCT
CAGCTTTTGG CTTCTGTCAA AGAGGGGGGG AAAGAGAGAA AAATTCATCG GGTGAGACGT
GGCGAAACGC TTGCATCAAT TGCCAGAATG CATCGTTGTT ATGTCAGTCA GTTGATCAAA
TGGAACAATC TTCGCAACTC GCGTATCTAT CCCGGTCAGA AACTCTCTGT ATTCGGCGCT
CCTGAAACCA TCCGCAGGTC TTCGAAGCCG TCTTCGGCAC CGTCGATAGT CTACCATAAA
GTTCGAAAGG GAGAGTCGCT TATCAGGATT GCCAAGCGCT ACAAGGTAAG CGTCAGCAAT
CTCGCCTCAT GGAACAATCT TGGTCGGCGC CGCACCATCT ATGCTGGTCA GAAGCTTAAA
ATATATGGCC GTGGTTCAGG TTCGACGTCG TCCTCTTCCA GCGTGTCGCA AACCCATATT
GTCCGTCGTG GAGAGACCCT TGGAGCGATT GCCAAGCGCT ACAAGGTCAG CGTCAGCAAT
ATCGCTTCAT GGAACAGTCT CGGTCGGCGC CGTACTATCT ATCCGGGTCA GAAGCTCAAA
ATATATGGCC GTGGTTCAGG TTCGACGTCG TCTTCTTCCA GCGTGTCGCA AACCCATATT
GTCCGTCGTG GAGAAACCCT TGGAGCGATT GCCAAGCGCT ACAAGGTGAG CGTCAGCAAT
ATCGCTTCAT GGAACAGTCT CGGTCGGCGC CGCACTATCT ATCCGGGTCA GAAACTCAAA
ATAAACGGCA GGACATCAGG TTCGACGTCA GGAGCAGCCA GGACGTATAT TGTTAAACGG
GGCGATACGC TGGGCGCGAT CGCGAGTCGC TACAAGGTGA GCGTCAGCAA GATTGTCTCC
TGGAATAATC TGGGAAAGCG TCGCCTTATC TATCCAGGTC AGAAACTGAA AGTTTCTTCA
CATTAA
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| Protein sequence | MSQRTSFSAL TLLFCLLIAT MLQPGRAYAA RSQDDQAVAA VLDSLVAATY FDDSHFRQWK
DDVPNGFSPT FIPQFDDETY AERIAELNRR TPIRLTYNEH VKNFIKLYAV DKRVMTAKIL
GLTKTYFPLF EQKLREYNMP TELKYLAIVE SALNPVAVSS ANAKGLWQFI YGTGKMYGLK
STSFVEDRFD PYKATVAACE HMTDLYDIYG DWFLVLAAYN AGAGNVNKAI RRSGGRRDYW
GIWSKLPSET RSYVPAFIAV TYVMNYYKEH NIIPEEPGYL YENIATVNVS DVLAFDQIHE
VLGIPLQDLE FLNPQYKRGV IPVIGPAPLS LRLPDHYVDD FNRKEKELYV HKSQSGIDRA
QLLASVKEGG KERKIHRVRR GETLASIARM HRCYVSQLIK WNNLRNSRIY PGQKLSVFGA
PETIRRSSKP SSAPSIVYHK VRKGESLIRI AKRYKVSVSN LASWNNLGRR RTIYAGQKLK
IYGRGSGSTS SSSSVSQTHI VRRGETLGAI AKRYKVSVSN IASWNSLGRR RTIYPGQKLK
IYGRGSGSTS SSSSVSQTHI VRRGETLGAI AKRYKVSVSN IASWNSLGRR RTIYPGQKLK
INGRTSGSTS GAARTYIVKR GDTLGAIASR YKVSVSKIVS WNNLGKRRLI YPGQKLKVSS
H
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