Gene Paes_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1348 
Symbol 
ID6460310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1468015 
End bp1468755 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content52% 
IMG OID642725332 
Productcobalt ABC transporter, inner membrane subunit CbiQ 
Protein accessionYP_002016017 
Protein GI194334157 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID[TIGR02454] cobalt ABC transporter, permease protein CbiQ 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.094753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000174719 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGCTTG AACTCTTTTC CGGCGGAAAA AGCCTGCTGC ACCATCTTGA TGCACGCATC 
AAGATACTCA TATACCTGCC CTTCATTCTC CTCTCAGCGC TGACGAACCA TACGCCTCAA
ACGCTGGCAA CGCTGGCGAC AGGAGTCGTC CTGCTCTCTA TCGGGCAGCT CTGGAGCAGA
CTGCTTCTGC AGAGGCTTGC TGCCGTGAAC ACCTTTATGC TCTTTGTGTG GGCGACACTT
CCCTTCTCAC TCGCAGGAAC AACACTGTTC GAAACCGGGC CGTTTTCGAT CTCGCGGGAA
GGCGTCGATC TTGCCATGCT GATAACACTC AAAGCCAATG CTATCGCGAT ACTGACCATC
ACCCTTTTAG GAACAACGCC TGTCATAGCG CTTTCGCATG CCATGCTGCA CCTAGGAGTG
CCGACAAAGC TCGTCACCAT GTTCTATTTT CTCTACCGCT ACACAGGCGT CATCCTGTCG
GAATTCGAAC GAATGAAGCG TATGCTTCAA TCAAGAGGCT TCAGTCCATC AACCGGTATG
CACACCCTGA AAACCTATGC ATACTTCACG GGAATGCTCT TCATTAAAAG TTATGAACGC
GCCGAACGGG TCTATCAGGC TCTGCTGTTG AGAGGATTCA CCGGCACGTT TCCGCTCCTG
ACCCATTTCA CCCTTACACC AAAAGACATC CTCTTTGCCG CCGCCGCCGC AATATCCATC
GTCATCTGCA TCAAGCTATG A
 
Protein sequence
MQLELFSGGK SLLHHLDARI KILIYLPFIL LSALTNHTPQ TLATLATGVV LLSIGQLWSR 
LLLQRLAAVN TFMLFVWATL PFSLAGTTLF ETGPFSISRE GVDLAMLITL KANAIAILTI
TLLGTTPVIA LSHAMLHLGV PTKLVTMFYF LYRYTGVILS EFERMKRMLQ SRGFSPSTGM
HTLKTYAYFT GMLFIKSYER AERVYQALLL RGFTGTFPLL THFTLTPKDI LFAAAAAISI
VICIKL