Gene Paes_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1307 
Symbol 
ID6458582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1427747 
End bp1429030 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content53% 
IMG OID642725294 
Productadenylosuccinate lyase 
Protein accessionYP_002015979 
Protein GI194334119 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.325105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCCA TCTGGACTGA CGAAGCCAAA TTCCAGCGCT GGCTCGACAT TGAAATCGCC 
GCTGTAGAAG CGAGGGTTGA AGCCGGGTTT GTGCCGGAAG AAGCGCTTGC TGTTATCAAA
GAAAAGGCCG CGTTCAACGT CGACGAAATC CTTGAGATCG AAAAAGAGAC CAAACACGAC
GTCATCGCAT TTCTCACCAA CGTCAACCGT AATGTTGGAC CACAGTCCCG CTACATTCAC
GAAGGTCTGA CATCATCGGA CGTCGGCGAT ACCTGCCTTG CCATGCAGAT GCGCGATGCA
GGAAAATTGC TCATCAAGGA TATCGAATCA CTGGTCGACG TCCTGGCCAA ACGCGCAAAA
GAGTTCAAAT ATACTCTTGA AATGGGCCGG ACCCACGGCA TCCACGCAGA GCCGCTCACC
TTCGGCCTGA AGCTCCTGCT CTGGCATCAG GAGATGCTGC GCAACCTCGA CCGCATGAAA
AGAGCCGTCG AGAACGTTTC TTTCGGTAAA ATTTCCGGTG CTGTCGGCAC CTACCAGCAC
CTCTCTCCCG ACATTGAAGA GGCTGTCTGT CTGAAACTCG GTCTCAAACC CGCTCCGATC
TCAACACAGG TTCTGCAGCG TGACCGCCAT GCAGAATTCC AGACGACGAT GGCTATCGCT
GCTGCCTCCA TCGAGAAATT CTCGGTCGAA CTGCGCCATC TGCAGCGCAC TGAAGTGCGT
GAAGCAGAAG AGTTCTTCAG CAAGGGGCAG AAAGGCAGTT CAGCCATGCC GCACAAGCGA
AACCCGATCA CCTTCGAACG ACTCACCGGT CTGGCAAGGA TTGTGCGTTC CAATTCGATC
GCAGCAATGG AAAACGTAGC CCTCTGGCAT GAACGCGATA TTTCACACTC CTCGGTCGAA
CGCGTGATCA TGCCCGATTC CACTATCGCC CTCTGCTATA TGCTGCGTAC ATTCCGCAAC
ACCATACAAG ACCTCCTTGT CTACCCGGAA AGAATGCAGG AAAACTTCAA TACATCCTAC
GGCCTGACCC TTTCGCAGAC GCTTCTCCTC GCGCTTACCG GCAAAGGTCT CACCAGAGAA
GAAGCCTACA AACTTGTGCA GCGCAATGCC ATGCAGAGCT GGGAAAACAA GGTACAGCTC
AAAGAACTGG TCCAGCAGGA TGAAGATATT CTCAAGCACG TCACAGCAGA AGAGATCGAA
CAGCTCTTCT CGTCAGAAAA TATTCTCGGC AAGCTGAAAA AAAGCGTCGA TATCATCTTT
GCCCGCAACG GCTTGGACAA CTGA
 
Protein sequence
MAAIWTDEAK FQRWLDIEIA AVEARVEAGF VPEEALAVIK EKAAFNVDEI LEIEKETKHD 
VIAFLTNVNR NVGPQSRYIH EGLTSSDVGD TCLAMQMRDA GKLLIKDIES LVDVLAKRAK
EFKYTLEMGR THGIHAEPLT FGLKLLLWHQ EMLRNLDRMK RAVENVSFGK ISGAVGTYQH
LSPDIEEAVC LKLGLKPAPI STQVLQRDRH AEFQTTMAIA AASIEKFSVE LRHLQRTEVR
EAEEFFSKGQ KGSSAMPHKR NPITFERLTG LARIVRSNSI AAMENVALWH ERDISHSSVE
RVIMPDSTIA LCYMLRTFRN TIQDLLVYPE RMQENFNTSY GLTLSQTLLL ALTGKGLTRE
EAYKLVQRNA MQSWENKVQL KELVQQDEDI LKHVTAEEIE QLFSSENILG KLKKSVDIIF
ARNGLDN