Gene Paes_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1304 
Symbol 
ID6458522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1423859 
End bp1424740 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content52% 
IMG OID642725291 
Productperiplasmic binding protein 
Protein accessionYP_002015976 
Protein GI194334116 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.76346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCG CACCTTCGGC CCCTGAACGC CTCTTGAGGT CACTGCTTCT TCTCTTTGTC 
CTGGCACATG CCGGATGCAC CAACAACAGC GACCAGAACA GATCAGCTGC AGACGCAAAA
CCTTCAATTG TCAGTCTGGC TCCGAGTATC ACGGAGATGG TCTACGCCAT CGGAGCTGGA
GATCAGCTTA TAGGAAGAAC CAGTGCGTGC GACTACCCCG CCAGTGCCCT TGAGGTTCAG
ATTGTCGGTG CATTCGGCAG ACCATCACTT GAAATGCTGA CCAGTCTGGA GCCGGATATT
GTACTCGATG CCGACCTTTC CGATGAACAG ATGGGCAACA GGATTGAAAA ACAGGGCATC
AGGCGCCAAC GACTTACCAT CAATACACCC GACGACATCC CGGACGCATT GCGCACCATA
GGGCGTGTCA CCGGCAACAC AGAACGAGCT GACAGCCTGG CATCAGCCAT TGAAAACGGC
CTTCAGGTTT TCCGTGCCAA GACAGCTGAA AAAGCATCAA GACCAAAGGT ATATCTGGAA
ATATGGGACG ATCCGCTCTG GACCGGTGGC TCGCAAAGCT ATACCTCGGC ACTCATCGGG
TATGCAGGAG GCTTCAATAT CGGAGACAGC GTCCCGAAAG AGTATTTTGA AATCTCTCCA
GAGTGGGTCA TCACTGAAAA TCCGGATATC ATTGCATGCA TGTACATGTC AAGAAGCATT
TCAGCAAGGC AAAAGGTCAT GGCAAGACCT GGGTGGGAAC ATATCAATGC TGTCAGAAAC
GAAAAAGTAT ACGACCACTT CGACAACAGT GTCTTTCTTC GGCCGGGCCC CAGAGTCCTC
GAAGGCATCG CAAAGCTTCA GGAAATAATC ACAACCCCCT GA
 
Protein sequence
MNPAPSAPER LLRSLLLLFV LAHAGCTNNS DQNRSAADAK PSIVSLAPSI TEMVYAIGAG 
DQLIGRTSAC DYPASALEVQ IVGAFGRPSL EMLTSLEPDI VLDADLSDEQ MGNRIEKQGI
RRQRLTINTP DDIPDALRTI GRVTGNTERA DSLASAIENG LQVFRAKTAE KASRPKVYLE
IWDDPLWTGG SQSYTSALIG YAGGFNIGDS VPKEYFEISP EWVITENPDI IACMYMSRSI
SARQKVMARP GWEHINAVRN EKVYDHFDNS VFLRPGPRVL EGIAKLQEII TTP