Gene Paes_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1298 
Symbol 
ID6460572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1417600 
End bp1418688 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content57% 
IMG OID642725285 
Producttransport system permease protein 
Protein accessionYP_002015970 
Protein GI194334110 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTG ATGATACCGC TTCCGGGGGC GCGCATCCCT GGCCCCGGCT TACCTTGCGG 
CTTCCTCTCG TGATGCTGCT TCTGGCACTG GTGCTTTTCT TTTTTCTGCT GGACCTCGTG
CTTGGCTCGG TGAGGATCCC TTTACCGAGT GTGGTCTCTA TTCTTATGGG CAACGGCTCG
GATATCGAGG CCTGGGACAA GATCGTTACC TATATCAGAT TGCCGAAAGC CCTGACCGCC
GTGCTGGCGG GGGCAGCTCT TTCGGTGAGT GGGCTGCAGA TGCAGACACT GTTCCGCAAC
CCGCTTGCAG GTCCTTCGGT ACTCGGTATT TCAGCCGGCG CCAGTCTCGG GGTGGCGATG
GTGATGCTTG CCTCCGGTTC CGCAGCCAAT GCGTTTGCCA TCCGACAGCT CGGGCTCGGG
GGGAGCTGGC TGATTGTGAT CTCCGCTACG CTCGGTGCGG CTTGCGTGCT GCTGGTCGTT
CTGGCAATAG CGGTCAGGAT CAAGGATAAT ATCGTGCTTC TGATCGTAGG TATCATGGTA
GGAAACATGA CGGTTTCCCT TATCAGTATA TGGCAGTATT TCAGCGAACC GGAAGAGATA
CAGGACTACC TTATCTGGAC CTTCGGCAGC CTCGGGGGGG TGCTTGGCAA TCAGCTCTGG
GTGCTCGCGG CGGTCATCGG TATCGGTCTC CTGGTCTCTT TTGCGGCATC GAAGTCCCTC
AATGTCATGC TGCTCGGTGA GAATTATGCC CGAAGCCTCG GCATGAGCAC GTTTTACGTC
AGGGTGACGG TCATCGCGGC AACCAGCCTG CTTGCCGGGA GCGTGACCGG TTTCTGCGGT
CCGATCGGTT TCATCGGTAT TGCCGTGCCG CACCTGACAC GCTCGATACT CGATACCTCG
GATCACCGTT TCCTGATGCC GGGTGTCTGC CTGATGGGGG CCCTTGTGAT GCTGGTGTGT
GACATTATCG CCCAGATGCC GGGAAGCCAG ACGACGCTGC CGATCAACGC CGTTACGGCG
CTTATCGGTT CGCCTGTAGT GATCTGGGTT ATTATGAAAA ACAGAAACCT GAAGTCTTCA
TTCTCATGA
 
Protein sequence
MSVDDTASGG AHPWPRLTLR LPLVMLLLAL VLFFFLLDLV LGSVRIPLPS VVSILMGNGS 
DIEAWDKIVT YIRLPKALTA VLAGAALSVS GLQMQTLFRN PLAGPSVLGI SAGASLGVAM
VMLASGSAAN AFAIRQLGLG GSWLIVISAT LGAACVLLVV LAIAVRIKDN IVLLIVGIMV
GNMTVSLISI WQYFSEPEEI QDYLIWTFGS LGGVLGNQLW VLAAVIGIGL LVSFAASKSL
NVMLLGENYA RSLGMSTFYV RVTVIAATSL LAGSVTGFCG PIGFIGIAVP HLTRSILDTS
DHRFLMPGVC LMGALVMLVC DIIAQMPGSQ TTLPINAVTA LIGSPVVIWV IMKNRNLKSS
FS