Gene Paes_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1295 
Symbol 
ID6458632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1414178 
End bp1415359 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content59% 
IMG OID642725282 
Productprotein of unknown function DUF105 
Protein accessionYP_002015967 
Protein GI194334107 
COG category[S] Function unknown 
COG ID[COG1865] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.41325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATG AGCGTGGTGA ACAAAAAACC GAAGATGCGA TGAAGCTTGG AATATATGGC 
AACGTAGAGG TGCACAGGGT TGACAAGATG CTTGTCGTGC AGTTTCTCAA ACCCCATCAG
GTTATTTCGA CCTGCCGTGT CCACGGAGGG CTGCATGACG GACTGGAGTG CGTATTCAAC
CACCAGTCCT GTGAACCTGC GGCTCATTCG AGAAAAGAGC TGAAAACGAT CATCTCCAAT
CCAGAAGAGT ACCTTTCCGG ATTATGCAGC CGTTACGCAC TGCCCCTCAA CAGCGCATCG
CTCGGGACGG CGGCAAACAT GAATTACGCC TCCATCGAAA CAGAGCGCTT CAGGGGGCTG
GAGGTGACGG CGATATGTAC CGGGGGCGTC GAGGGAAATG CCGGCAGGGT CGGGGATCCT
GCGTCTGTAT GGGAGGAGAA CGGCTCGTTC AGGCCGCTCG ATGGGACCGG CAGGGAGCCT
GCGGGGACGA TCAATACCAT CCTCGTCATC AACCGCGAGC TCAGCAGGGG GGCCATGGTG
CGCTCCATCA TGACCGCTAC CGAAGCAAAA ACCGCGGTTC TCCAGGAGCT TGCCGTATCC
TCACGCTATT CAGACGGCCT GGCGACCGGA ACAGGGACCG ACCAGATTGC TGTCGCGTCG
GCTCTGAATG GCGAACAGCC CCTGACAAGT GCCGGCAAAC ACGCCAAGCT CGGGGAGCTG
ATCGGCCGGT CTGTCCAGCA GGCAATCCGT AAAACCCTGT CCCTGCAGAA CGGTCTCACT
CCCGAAAGCC AGCGTTCCGT TCTCGCCCAT ATCAGGCGGT TCGGCGCAAC TCGTGACAGC
ATGGTCGACG CCATAACGGC GAGGCTCGAT GACGGGACGG GTGGAGTCTT TCAGCGCAAT
TTCGACGGCT TCGACCGCGA CCCCATGGCG GTCGGGGCTG CCTGTGCGCT CGTTCACCTG
CGCGACAAGA CGGCCTGGGG GATTCTGCCT GAATCCTGCT GGAAAGAGCA GCTCGTGCTC
TATGGCGCAT TGCTTGCAGC GGCAGTGGCC CATCGGCATG AGCACTGTAG CCGTTATGCC
GGCCAGCTCG AGCATGAAGC CGCGGGAACA GGTAACGACG AATTTCTTAA ATTTCTTTTT
GCGTGCTGCG CGCTGGGGTA CAGTGAAAAA TGGAAAGAGT GA
 
Protein sequence
MLDERGEQKT EDAMKLGIYG NVEVHRVDKM LVVQFLKPHQ VISTCRVHGG LHDGLECVFN 
HQSCEPAAHS RKELKTIISN PEEYLSGLCS RYALPLNSAS LGTAANMNYA SIETERFRGL
EVTAICTGGV EGNAGRVGDP ASVWEENGSF RPLDGTGREP AGTINTILVI NRELSRGAMV
RSIMTATEAK TAVLQELAVS SRYSDGLATG TGTDQIAVAS ALNGEQPLTS AGKHAKLGEL
IGRSVQQAIR KTLSLQNGLT PESQRSVLAH IRRFGATRDS MVDAITARLD DGTGGVFQRN
FDGFDRDPMA VGAACALVHL RDKTAWGILP ESCWKEQLVL YGALLAAAVA HRHEHCSRYA
GQLEHEAAGT GNDEFLKFLF ACCALGYSEK WKE