Gene Paes_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1293 
Symbol 
ID6458711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1411914 
End bp1412675 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content58% 
IMG OID642725280 
Producturoporphyrin-III C-methyltransferase 
Protein accessionYP_002015965 
Protein GI194334105 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0007] Uroporphyrinogen-III methylase 
TIGRFAM ID[TIGR01469] uroporphyrin-III C-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAA CACACAACGG GGGACGGGTG GTGATTGCCG GTGCAGGCCC GGGAGATCCG 
GAGTTGCTGA CCGTGAAGGC CGCCAGACGG CTGCAGCAGG CCGATGCCGT CCTGTATGAT
TCCCTGGTGA CAAGGGAAAT CCTCGATCTT GCCGCAAAGG GAGCCGATAT GGTGCCTGTC
GGAAAACGGT GCGGGGACGG GCAGGACCAG ACACAACGGC AGAATGCCAT CAATGAGCTC
ATGCTCGATT ATGCCCGCAG GGGAGCGCTC TGTGTCCGGC TCAAGGCGGG AGATCCCTTC
GTGTTCGGAA GAGGGGTCGA AGAGGTTCGT TTTCTGACCG AACGCCAGGT CACGGTTGAG
GTCATTCCCG GAATCAGTGC CGGCATAGCG GCTGCGAACC TTTTTCACGT TCCTGTGACC
GAGCGTTACA GAACCTCTTC GGTAATATTG AGTACAGGGC ATACGTCCAC CTGCTCGATG
GAGGAGTTCG ATAGTGTGGT CGCGTTGCTG AAACAGGGTA CTCCGCTTGT GCTGTACATG
GGAATGAAAC ATCTCGAGTG TATCTGCCAG CGGTTGCTGG ACGCCGGATT TTCGCCGGAT
TTTCCGCTCT GCGCAGCATC ACGGGTGTCC ATGCCCGATC AGCAGCTGAT CTGTGCAACG
CTGGGGACGA TCTGCTTGCT TCTGGTCAAA ACACCGTTGC CGACACCTGT CGTGTTTTTC
GTGGGGGAGC ATGCCGTCCC CATATCGCAG CAGACCGTAT AA
 
Protein sequence
MSETHNGGRV VIAGAGPGDP ELLTVKAARR LQQADAVLYD SLVTREILDL AAKGADMVPV 
GKRCGDGQDQ TQRQNAINEL MLDYARRGAL CVRLKAGDPF VFGRGVEEVR FLTERQVTVE
VIPGISAGIA AANLFHVPVT ERYRTSSVIL STGHTSTCSM EEFDSVVALL KQGTPLVLYM
GMKHLECICQ RLLDAGFSPD FPLCAASRVS MPDQQLICAT LGTICLLLVK TPLPTPVVFF
VGEHAVPISQ QTV