| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1286 |
|---|
| Symbol | |
|---|
| ID | 6458619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | - |
|---|
| Start bp | 1403820 |
|---|
| End bp | 1404929 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642725273 |
|---|
| Product | cobalamin (vitamin B12) biosynthesis CbiD protein |
|---|
| Protein accession | YP_002015958 |
|---|
| Protein GI | 194334098 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
|---|
| TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCGC AGAAGGGCGA ACTGCGGCAG GGCTATACCA CCGGTTCGTG TGCAACAGCG
GCTGCCCGGG CGGCGCTGCA CCTGCTGCTG GATGGTCAGA TGCCCGAACG GGTATCCATC
ACCCTTCCGG ATGGCGGCTC TGCAGAGTTC AGCCCTGAAG CGGGACGTCG CGATGCAGCG
GGGGCATCCT GCTGTGTGAG AAAAGATGCG GGGGACGACC CCGACGTGAC GAACGGGCTT
TTGGTCTGCT GCAGGGTTGC ACTGCTCGAT GATGAGCCGG AAGGCCATAT CGAGTTCTGC
CGGGGGGAGG GGGTCGGGAT GGTTACCCTG CCCGGTCTTG GCATCGATGT GGGAGGTCCG
GCGATCAACC CCGTCCCGCG ATCGATGATC CGGGAGGCGC TCGGTGGTCT GCTCGATCGT
TACGGTCTCC GTTGCGGGGT ACAGGTGACG GTGTCCGTTC CCGGAGGTGA AGAGGTTGCC
CGTAAAACCC TGAACGCGCG CGTGGGAGTC AAAGGCGGCA TTTCGATCAT CGGTACCAGC
GGACGGGTCA TTCCCTACAG CGAAGAAGCA TATCTCGAAA GCATCGCCCG TACGATCAGG
GTCGCCCGTC ACAGCGGAAG CACGCACCTC GTGGCGTGCG CAGGTGCGAG AAGCGAAAAG
CTTCTCCGGA GGATGTATCC CGATCTTCCT GAAACGGCCT TTATTCACTA TGGTAACAGG
GTCGGCAGCA CCCTCGACAT GATTCAGCAT GACGGGGGTT TCCGCAACCT GACCGTCGGG
GTGATGCTCG CCAAGGCCAC CAAGCTCGCA CAGGGTGAAC TCGATCTCTC CAGCAGGACG
GTCGGCCTCA ATCCGCAGTT CATCGAGCAT CTGGTACGCA AGACCGGTTA CGCAGAAGAT
GTAGCTTTGG AGGCGAAAGC CCTTGAACTG GTGCGTTCAC TTGTCGATAT TGTACCGTTC
AGCTCTTCGG AACCGTTGTA CCGGGCACTG GCAGAGTCGT GCCGCAGGGT CTGTCGTAAC
CGGTTCCCTT CAGGAGGCCT CGAATTCGTG CTCATGACCA TGCAGGATGG CTGTATTCTC
TGTGACGAGC ACGGGTGCCG TGATGTGTGA
|
|---|
| Protein sequence | MTAQKGELRQ GYTTGSCATA AARAALHLLL DGQMPERVSI TLPDGGSAEF SPEAGRRDAA
GASCCVRKDA GDDPDVTNGL LVCCRVALLD DEPEGHIEFC RGEGVGMVTL PGLGIDVGGP
AINPVPRSMI REALGGLLDR YGLRCGVQVT VSVPGGEEVA RKTLNARVGV KGGISIIGTS
GRVIPYSEEA YLESIARTIR VARHSGSTHL VACAGARSEK LLRRMYPDLP ETAFIHYGNR
VGSTLDMIQH DGGFRNLTVG VMLAKATKLA QGELDLSSRT VGLNPQFIEH LVRKTGYAED
VALEAKALEL VRSLVDIVPF SSSEPLYRAL AESCRRVCRN RFPSGGLEFV LMTMQDGCIL
CDEHGCRDV
|
|---|
| |