| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1285 |
|---|
| Symbol | |
|---|
| ID | 6458621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 1402708 |
|---|
| End bp | 1403748 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642725272 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_002015957 |
|---|
| Protein GI | 194334097 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGT TTCTCACTCC CCTGGCTGCA ATGCTGCTGC TGTTGACGAT ATCCTCCTGC
TCACCTCCGG CCCCATCCGG GAGTAAGGAT GCCCGCACCA TCACCGACAT GGCCAAGAGG
AGCATGACCG TTCCGAAGAC CATCACGAAG GTCTACGTCA ACCGCCCGGG AAGCATCCTC
CTGTACGCCA TCGATCCGGA GCTGATCGTC AACCGCTCGT TCAATTTCAC GCCCGAAGCC
GCCCGATTTC TTTCGGAAGA CTACCTGGCG CTGCCCCATA CCGAGGGATC AGCCGAGGAA
ATCCTGAAGC TCGCTCCTGA CCTTATCCTC ACGTTTTTCG ACATCAATGC CGGCTCGATC
GACGAGGCGG ACAAGCTCGC CGAAAAAACC GGCATCCCGG TCTATCTCGC CTCACTGACC
CTTGAGGACT ACCCGGAGGT ATTCAGGCGC CTGGGCAGGC TGCTCGACCG CGAGGAGCAG
ACGAACCGCA TGCAGGATTT TATCGACAAG CACGTGGACC CGGTCCTCGA GCAGGCGCAG
AGCATCGACA AACAGGACAG GATGAGCGTC TACTACGCAG AAGGAGACCG CGGGCTGCAT
ACCGATCCTG CAGGATCGCT GCACAGCAGG CTGATCACGA TGACCGGAGG CATCAACGCC
GCCGACATCG ACGCGGTCAG CCGGAAAGGG CTGAGCGAGG TCTCGATGGA GCAGCTACTC
ATGTGGGATC CGGATATCGT CCTGGTCTGG GCCGGACTTG GAAAAATCAC ACCGACCATG
GCACATATCC AGAACGACCC GATCTGGTCA CGTCTCCGGG CAGCACGAAA CGGCCGGATC
TACCAGATCC CCTACCTGCC TTATGGCTGG TTCGACCGTC CGGCAAGCAT CAACCGGCTG
CTCGGCATTC CGTGGCTGGC TGACCTGCTC TACCCTGATG TCTACGACAT CGACATCGAC
GCGGTTGTCG CAGAGTACTT CAAAACCTTC TACCACGACG AACTGAGCAG CGAAGAGGCT
CAAGCACTGC TGAACCCATG A
|
|---|
| Protein sequence | MKTFLTPLAA MLLLLTISSC SPPAPSGSKD ARTITDMAKR SMTVPKTITK VYVNRPGSIL
LYAIDPELIV NRSFNFTPEA ARFLSEDYLA LPHTEGSAEE ILKLAPDLIL TFFDINAGSI
DEADKLAEKT GIPVYLASLT LEDYPEVFRR LGRLLDREEQ TNRMQDFIDK HVDPVLEQAQ
SIDKQDRMSV YYAEGDRGLH TDPAGSLHSR LITMTGGINA ADIDAVSRKG LSEVSMEQLL
MWDPDIVLVW AGLGKITPTM AHIQNDPIWS RLRAARNGRI YQIPYLPYGW FDRPASINRL
LGIPWLADLL YPDVYDIDID AVVAEYFKTF YHDELSSEEA QALLNP
|
|---|
| |