Gene Paes_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1269 
Symbol 
ID6460498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1372718 
End bp1374199 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content52% 
IMG OID642725257 
Productcobyric acid synthase 
Protein accessionYP_002015942 
Protein GI194334082 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1492] Cobyric acid synthase 
TIGRFAM ID[TIGR00313] cobyric acid synthase CobQ 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATC TCGCGGTTTT CGGCACTGCA TCCGATGTCG GCAAAAGCGT CATTGCGACC 
GCCTTGTGCA GAATATTCAG CAACGAGGGT ATTGATGTGG CACCCTTCAA GGCGCAGAAT
ATGTCCAACA ACTCCGGGGT GACACCTGAT GGTTTTGAGA TAGGTCGGGC ACAGGTGGTG
CAGGCAGAAG CGGCCAGGGT GGTCCCGACT GCGGACATGA ACCCTGTTCT GCTCAAACCC
AATACCGATA CCGGCGCTCA GGTTGTACTG CAGGGCAAAG CGGTTGCGAA CCGTTCAGCC
AGGGATTATT TCGGCAACAC CCGGCCCTGG GCTGAAGCTG CGTTCGAGAG TCTCAGGCGG
CTTCAGGCAG CCCACGATAT GCTTGTGATC GAGGGGGCTG GATCATGTGC GGAAATGAAT
CTTTACGACA GGGACTTTGT CAATTTTAAA ACTGCCGAAG CAGCTGATGC TCCGGTGATT
CTTGTCGCCG ATATCGATCG GGGAGGTGTG TTCGCTCAGG TGATCGGAAC AGTTTCGGTG
CTGCCTCCGG AAGCAAAAGC GCGGATTTCA GGCGTGCTGG TCAACCGTTT TCGTGGAGAC
ATCTCGCTGT TTGAGGATGG TGTTCGTTTT CTTGAAGAGC ATTCAGGGAT TCCTGTGCTC
GGTGTTGTTC CTTTTTTCCG GGGATTTTCG ATTGATTCCG AGGACGCCGT TCCGCTACAG
ACCATTGTCG ATCCCTCAGG CTCGCCTGAC CCCGGGAAAA TCAGTATTGC TGTCATCTAT
TTTCCTCATA TTTCAAATTT TACCGATTTT GCTGTTTTGG AACGCGAGGA GGGTGTTGAG
CTGCATTATC TGCATCATGC AAAAGCCCTT GATGGCTATC AGGCGGTTAT CCTGCCGGGG
TCGAAAAACG TTCGCGGTGA TATTGAGTGG TTACGCCAGC AGGGGTGGGA GAGCCGTCTT
GAGGATTTTC GTCGGAATGG TGGTGTTATT GCCGGTATTT GCGGCGGTTA TCAGATGCTT
GGGCGTTCTA TTGCTGACCC GTATGGCGTC GAAGGGGTTC CAGGCAGGAC AGCAGGCTTG
GATCTGCTGC CAGTCGAAAC TGTTCTTCAG CAGGAAAAGA CACTGTGCAA CGCCAGGGGC
GTTATGAGCG GTAACGGTTA TAGCGTGCAT GGTTATGAAA TTCATATGGG TGAAACCTCC
TGCCATGGCG ATGCGCTTCC TCTTTTTGAC GTGACGACAC GAAACGGTAT TGCTGTTTCT
GCTCGCGACG GTGTCATGAC TTCTGATACA AAGGTCTTCG GGACCTATTT TCATGGTGTT
TTTGATGCCC CGCTTTTTCG GCACTGGTTT TTCAGACAAC TGAGTGCATC CTATACTCCG
TCTGAAAGAA CAGAGGACAG GGATGAGGAT TATAACCGGC TTGCGCGACA TGTTGCAGCT
CATCTTGATC TTGATAAGCT GTACAGGATT ATCGAAAAAT AG
 
Protein sequence
MKNLAVFGTA SDVGKSVIAT ALCRIFSNEG IDVAPFKAQN MSNNSGVTPD GFEIGRAQVV 
QAEAARVVPT ADMNPVLLKP NTDTGAQVVL QGKAVANRSA RDYFGNTRPW AEAAFESLRR
LQAAHDMLVI EGAGSCAEMN LYDRDFVNFK TAEAADAPVI LVADIDRGGV FAQVIGTVSV
LPPEAKARIS GVLVNRFRGD ISLFEDGVRF LEEHSGIPVL GVVPFFRGFS IDSEDAVPLQ
TIVDPSGSPD PGKISIAVIY FPHISNFTDF AVLEREEGVE LHYLHHAKAL DGYQAVILPG
SKNVRGDIEW LRQQGWESRL EDFRRNGGVI AGICGGYQML GRSIADPYGV EGVPGRTAGL
DLLPVETVLQ QEKTLCNARG VMSGNGYSVH GYEIHMGETS CHGDALPLFD VTTRNGIAVS
ARDGVMTSDT KVFGTYFHGV FDAPLFRHWF FRQLSASYTP SERTEDRDED YNRLARHVAA
HLDLDKLYRI IEK