Gene Paes_1268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1268 
Symbol 
ID6458423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1371586 
End bp1372680 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content50% 
IMG OID642725256 
ProductL-threonine-O-3-phosphate decarboxylase 
Protein accessionYP_002015941 
Protein GI194334081 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01140] L-threonine-O-3-phosphate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAG ACAATCTTTA TCATCATGAA CACGGAGGAG AACCGGAGCG CTACTGCGTT 
ACAGGAACTC AGCCACTCCT TGATTTCAGC GTCAATATCA GTCCGCTTTC TCCATCGCTT
CCGGAGGTTT CTCTCGACGC GTTTTCTCTT CATTGTTACC CTTCCATTGA TGGACGTGGT
ATACGGGAAT TCTACTCGAA CCGTTTCAGT CTTGACGATG AAACGCTGCT GCCTCTCAAT
GGCGCTATCG AAGGGATCTA TCTTGTTCCC AGAGCGCTGC GTTTGCAACG GGTTATGGTG
CTTGCCCCAT CATTTTTCGA CTACGAACGG GCCTGCCGGA TTGCAGGGGC GAAGGTCAGC
TATCTGAGAC TTCAGGAAAA GGAGCTGTTT CTTCTGCCCG GCATCGACGA GATTGCAGAG
CAACTGCAGG ATGCCGACGC GCTGTTTGCC GCAAACCCCA ATAATCCCAC CGGGACGAGA
TTTCCGAAGG AGCTTGTCAT GGCGCTTGCA AGCCGGTTCC CTGATAAATG GTTCATTATC
GATGAAGCTT TTATCCAGTT CGTTGACGAT TTTCCCGGTG CTTCGCTGAT GCGTGATGTT
CGGGCTTTCC GCAATATTGT CGTGATCAAT TCCCTGACGA AATTTTATGC GTTGCCCGGG
CTTCGGCTGG GAGCAGCTAT TGCTCATCCG GATGTTATCA AAATCCTTCT TGATTTCAAG
GAACCCTGGA CGGTCAATGC CATTGCGGAA GCTGTTGCCT TAGAGCTGCT TCATGCTGGT
GATTTCGAGG AGGATGTCCG TCGCCTGATC ACGGTGGAGC GGGCTAAAAT TTATAAACGT
ATGAAAAACG TCCCGGACAT CGCGATCCGT GGATATGCCG CAAACTTTTT TCTTGCTCAG
TGGAACAGTG GATCAAGCCT CAATGATCTT CTCGATTTCC TGATCGCAAA AAATATCTAT
GTCAGGGATT GTCGGAATTT TCCCGGTCTT GAGGATAATT ATTTCAGGTT TGCTATCCGT
AAACCGGAAG AAAACGACTA TATGCTCGAT CAGCTTCAGC TTGTCGGCGG CGAGGTCGGG
ATGGTTGAGA AATGA
 
Protein sequence
MSRDNLYHHE HGGEPERYCV TGTQPLLDFS VNISPLSPSL PEVSLDAFSL HCYPSIDGRG 
IREFYSNRFS LDDETLLPLN GAIEGIYLVP RALRLQRVMV LAPSFFDYER ACRIAGAKVS
YLRLQEKELF LLPGIDEIAE QLQDADALFA ANPNNPTGTR FPKELVMALA SRFPDKWFII
DEAFIQFVDD FPGASLMRDV RAFRNIVVIN SLTKFYALPG LRLGAAIAHP DVIKILLDFK
EPWTVNAIAE AVALELLHAG DFEEDVRRLI TVERAKIYKR MKNVPDIAIR GYAANFFLAQ
WNSGSSLNDL LDFLIAKNIY VRDCRNFPGL EDNYFRFAIR KPEENDYMLD QLQLVGGEVG
MVEK