| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1267 |
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| Symbol | cobD |
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| ID | 6458399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1370615 |
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| End bp | 1371589 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642725255 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_002015940 |
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| Protein GI | 194334080 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGTATC CAGTTGAATA CCAGATTGCA GCTGCTTTTC TTGTTGACTT TCTTGCCGGT
GATCCGCGTT TTCTGCCGCA TCCTGTCAGG GCAATAGGGT GGCTGGCTGC TGCTACGGAG
CGTATCCTTC GCTCGATTCG TTGTCTTCAT CTCCGCATTG CAGGAGTTAT GGCTGTTATC
ATTGTCGTTG GAGGAACGGT TGCTCTGGCA TATGCTTTTC TGTTGCTCTG CGGTTTTCTG
CATCCGCTGC TGCAGTTCAC TGCAGGGATC CTCATCTTAT ATTTCAGTAT CGCATCAAGA
GATCTGGCTG ACCACGCTTA TGCTGTACTG AGGCCTCTTG CCGTGAACGA TATCGGCCAG
GCCCGTCGGA GTGTCAGCAT GATTGTCGGG CGAGATACCT CCAGCCTTGA TGAACAGGGA
ATCGCACAGG CAGCAGTTGA AAGTGTTGCC GAAAATACGG TGGACGGTGT TACGGCACCG
CTCTTTTATG CCCTGCTGTT CGGCCCGGTT GGAGCTCTTG CTTATAAAGC GGTCAACACG
CTTGATTCAA GTTTCGGCTA TAAAAATGAA CGCTATCTTG AATTTGGATG GGCTTCGGCG
CGTTTTGACG ATCTTGTCAA TTTTCTTCCG TCGCGTTTGA CAGTGCCTTG TATTGCGGCT
GCTGCCGCTC TGATGAGACT TCGTTACCGG GATGTGCTGC CATCTGTCCT GAGCACTGCA
GGGAAGCATA CCAGTCCTAA TGCCGGTTAC CCTGAGGCGG CTTTTGCCGG AGCCCTCGGC
GTGCGTTTCG GCGGTCCGAG GAGTTATGGT GGAGTGGTGA CAGATCTTCC GTATCTTGGC
ATTGCAGAGA ATAGGCCGAA CATTGATTCG ATCAAACAGG CGGTTGTTCT CATGCTGCTT
TCTTCAGGTG TTTTTCTTGT GACGGGAGTT TTTTTGCGCC TTGTTGTTCA GGCGGCAATG
CTTTATCTGA TGTGA
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| Protein sequence | MMYPVEYQIA AAFLVDFLAG DPRFLPHPVR AIGWLAAATE RILRSIRCLH LRIAGVMAVI
IVVGGTVALA YAFLLLCGFL HPLLQFTAGI LILYFSIASR DLADHAYAVL RPLAVNDIGQ
ARRSVSMIVG RDTSSLDEQG IAQAAVESVA ENTVDGVTAP LFYALLFGPV GALAYKAVNT
LDSSFGYKNE RYLEFGWASA RFDDLVNFLP SRLTVPCIAA AAALMRLRYR DVLPSVLSTA
GKHTSPNAGY PEAAFAGALG VRFGGPRSYG GVVTDLPYLG IAENRPNIDS IKQAVVLMLL
SSGVFLVTGV FLRLVVQAAM LYLM
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