Gene Paes_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1265 
Symbol 
ID6458410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1368155 
End bp1369408 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content54% 
IMG OID642725253 
ProductABC transporter related 
Protein accessionYP_002015938 
Protein GI194334078 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTTT CCGCCCTTGC CATAGACAGT CTTACTGCCG GATATGGCGA GCACCGTGTT 
CTGGATTCGA TTTCAATGGA GATTGGTTCG GGGGAGTTCG TTGTTCTGAT CGGGCCCAAC
GGGTGCGGCA AGAGTACGTT GTTGAAAACA GCGGCGGCGT TGCTCAAGCC GGTTGCGGGA
CGGGTCAGTC TGTTCGGGCA TGATGTGCAA AAGCTCAAGC CATCCGAGCG ATCTGCAATG
CTCGGAGTTG TTCCTCAGAA GGTCGAGTCT CCAATGGCCT ATACTGTCGG TCAGATTGTC
ATGAACGGGC GGACCGGATC CGGACTTCCT TGGCGAGCAC TGTCGGAAAA GGATTATGTG
ATTATCGAAC GCGCAATGAT CTATACCGAT GTGCTCCATC TCCGGGATCG TTATTTCATG
GAGTTGAGCG GAGGTGAGCA GCAGAGGGTT ATTCTTGCTA TGGTTCTGGC TCAGGAGCCG
AAGATGATCA TGCTCGATGA ATCTATCTCG CATCTCGATA TCAATCATCG TTACGAGGTT
CTTCGCATTC TGAAACGGAT CAATCATGAG CGGGGGATGA CGGTGGTTCT GGTCAGTCAC
GATCTGAGCC TCTCGTCTGA AATAGCCGAC AGGCTCATTC TCATGGACGC AGGACGTGTC
GTTGCTGAAG GAAATCCCCG GGATGTTCTT CGGGCCGATA TCCTCAGCCG TGTCTATGAT
TGCGAACTAC AGGTCAAGCA CGATCCTCTT ACCGGTACCG TCAATGTGAC CGGTGTGCTT
GATGGTTTTC GCAAGACCTC CGAGCATAAG CTGACTGTTC ATGTGATTGC CGGAGGTGGA
ACCGGTATTG AACTCTATCG TCGTCTTGGA TTGCATGGTT ACCGTGTCAC GACCGGCGTG
CTCAACAGGA TGGATTCGGA TGCCGAAGCG GCAAATGCGC TCGGCGTCGA GGCTGTGCTC
GACAAACCTT TTTCCGCGAT CAGCGGTACG GCGTTCCAGA GTGCTCTGGA ACTTGCCTTA
GAGGCCGATA TAGTTGTGGT GAGCGCGGTT CCGTTTGGGG CTGGCAACCT GATCAATTTA
CGGATTGGCG AACAAGCACT TGATGCAGGC AAAGATGTCT GGATTGCTGA AGGTGTTGCC
GAACGCGACT ATACCGAGGA TCGGCAGGCT GATGCTCTGG TCCGGCAGCT TGTCGCAAAA
GGAGCCCGTA TGTGGCCGAG CCTTCATATG CTGATCAAAG AGCTGAAAGG ATAG
 
Protein sequence
MSLSALAIDS LTAGYGEHRV LDSISMEIGS GEFVVLIGPN GCGKSTLLKT AAALLKPVAG 
RVSLFGHDVQ KLKPSERSAM LGVVPQKVES PMAYTVGQIV MNGRTGSGLP WRALSEKDYV
IIERAMIYTD VLHLRDRYFM ELSGGEQQRV ILAMVLAQEP KMIMLDESIS HLDINHRYEV
LRILKRINHE RGMTVVLVSH DLSLSSEIAD RLILMDAGRV VAEGNPRDVL RADILSRVYD
CELQVKHDPL TGTVNVTGVL DGFRKTSEHK LTVHVIAGGG TGIELYRRLG LHGYRVTTGV
LNRMDSDAEA ANALGVEAVL DKPFSAISGT AFQSALELAL EADIVVVSAV PFGAGNLINL
RIGEQALDAG KDVWIAEGVA ERDYTEDRQA DALVRQLVAK GARMWPSLHM LIKELKG