| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1256 |
|---|
| Symbol | |
|---|
| ID | 6458576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 1358761 |
|---|
| End bp | 1359348 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642725244 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002015929 |
|---|
| Protein GI | 194334069 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00157199 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.560162 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATTT CACTGATCGC TATAGCACCG CCATCAGCTA TCCCTCTTAT GGCAAAGAAA
AAACCTGGCA CTGTTTCCGC CACCACGAAT ATCTCTATAG CGCTCCCGGA TTTCATCATT
CTTCACTACT ACTCCGGACT GACCCTCAAT TTTGAACAGT TTTCATCAGC GGTTGACCAG
GGATCGGCAG ATTTCGAGGT CCAGTGGTCC GGAACAGCCA AAAGCAACAA TGCTCTCGCA
GAGGAAAATA CCGTTTCACA ACTGCCTGCC AGGATCACCA TACAGATGCC GAATGTCTGG
GCCATCAGGG GACTTTCACC TTCAGGCAGC GCAATGATCT CCATCGAAAT CACAAACAGC
AATATCGTTT CAGGAACGTC AGTAATCACC ATGGCCAGCG GTAGCGGCAA TATCGAAATC
GATGATAACG CCGGCCATTC AGGAACAACT ATCAATACCA ATCTCAACGG CATCGGGACA
AACACCGCCA CGATAGGTAA CGTTCAAATC ACACTCGACT TTTCCAGGAC TACCCGTGCG
GGCCTTCACA CCGGAGGCCA GTACAAAATA ACAGCAGAAA CGATCTGA
|
|---|
| Protein sequence | MLISLIAIAP PSAIPLMAKK KPGTVSATTN ISIALPDFII LHYYSGLTLN FEQFSSAVDQ
GSADFEVQWS GTAKSNNALA EENTVSQLPA RITIQMPNVW AIRGLSPSGS AMISIEITNS
NIVSGTSVIT MASGSGNIEI DDNAGHSGTT INTNLNGIGT NTATIGNVQI TLDFSRTTRA
GLHTGGQYKI TAETI
|
|---|
| |