Gene Paes_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1248 
Symbol 
ID6459285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1351543 
End bp1352688 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content50% 
IMG OID642725236 
ProductKWG repeat protein 
Protein accessionYP_002015921 
Protein GI194334061 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.629707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATA TACAACAACG GTTACGTGCT GCATTGTTAT TCCCGTTGGT GTTTGCCGCC 
ATATGGCTGA ACGGTTGCAG CAGGGAGCAG GGAGGGCGGC AGGAAATCCG GTCCGAAGGG
GTTCGTGCTG TGGCGGCAGA ATCTCTGCAT GTGGCTTTTA GCGGAGGCAA ATTCGGTTAT
ATCGATCCTT CCGGTACTAT GGTGATCACT CCCCGGTTTG ACATTGCCTA TGTTTTCCGT
GACGGGGTTG CCCCGGTCAG AGTTGGTGAA AAATGGGGTT ACATCGACGC TTCGGGCAGC
TATATTATCG AACCGCAGTA CACTCAGGTG ACTCCGTTCA AGAAAGGGTA TGCCCGGGTT
CATGACGGTG ATAAACAGAT CTATATCCGC AAGGATGGTT CCCAATTGGG GTCGTTGAAA
TTTGATTTCG GTTATCATTT TTCAGAAGAT ATGGCCTTTA TCGCTCTTGA TGGAAAATAC
GGGACAATCG ATACGACCGG TGCTATTGTG ATCGAGCCGC AGTATGAACA GGGTTATTTC
TTTTCCCACG GGCTTGGTAT GGTCAAGATA GATGGCCGTT ATGGTTATAT CGATAAAGCG
GGTAATCAGA TTGTTCCTCC GCTCTACACC GAAGCGGATA ATTTCTGGGG GAGCAGGGCA
AAGGTCAAGG TTGGCAATCT CTGGGGTTTT ATCGATACCA CGGGAGCTAT GGTTATCAAG
CCCCGGTTTG ATGATGCCTG GAGTTTTATT GAAAATATGG CAAGGGTCAG GAACAATGGG
CTTTGGGGCT ATATCGATAC AACGGGTACC GAGGTTATTG CATGCAGATA TGACAAGGCT
GAGAATTTTT CCGGTGGTTA TGCACGCGTT TCCAAACGCG GAAAATGGGG CTTTGTTGAC
AAGAACGGAC GGGAAGTCGT TCCAGTTACA TACAGTGAGG TGAAACCTTT CAGCGAGGGC
ACGGCTCCTG TTCGCGTCGC GACACGATGG GGGTATGTCG ATACGGTTGG GACAATGGTG
ATCGAGCCCC GTTATGTTCA GGCAGAGAGC TTTCATAATG GGCTTGCCCG TGTCAGCCTG
AAAGGCTCCC AAGCCTATAT AGATCCGGAC GGCAACGTTG TCTGGAGCGA AAAACCTATT
CGATAA
 
Protein sequence
MNDIQQRLRA ALLFPLVFAA IWLNGCSREQ GGRQEIRSEG VRAVAAESLH VAFSGGKFGY 
IDPSGTMVIT PRFDIAYVFR DGVAPVRVGE KWGYIDASGS YIIEPQYTQV TPFKKGYARV
HDGDKQIYIR KDGSQLGSLK FDFGYHFSED MAFIALDGKY GTIDTTGAIV IEPQYEQGYF
FSHGLGMVKI DGRYGYIDKA GNQIVPPLYT EADNFWGSRA KVKVGNLWGF IDTTGAMVIK
PRFDDAWSFI ENMARVRNNG LWGYIDTTGT EVIACRYDKA ENFSGGYARV SKRGKWGFVD
KNGREVVPVT YSEVKPFSEG TAPVRVATRW GYVDTVGTMV IEPRYVQAES FHNGLARVSL
KGSQAYIDPD GNVVWSEKPI R