Gene Paes_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1235 
Symbol 
ID6459368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1342611 
End bp1344077 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content47% 
IMG OID642725223 
Producthypothetical protein 
Protein accessionYP_002015908 
Protein GI194334048 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.212609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0713151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATGC ATCGGACAAC AATACAGAAA GTTTTCATCC TGACAGCTAT CCTTGCGCTT 
CTTGTCGCGG GAGTCTTTGC TGTACTGAAA ACCTATGAAC GATACCGCAT TACACCTCCC
GTGGAAGTCG CCAATGCCAT CACGGTTGAG GTTCCTGACT CGCGGTTTCA GATCCCCGTC
ATCATTGATC TGGATCTTCT TGAACGATAC ATCAATACCA AGCTAACGGG AACATTTCTT
ACAAAAACGA TCTTCACCGG CAAGTCAAAA AAAGATGAGG TACAGGTCCG GCTCTCGCGC
ACCGATCCCC TCTCCATAAC ATCGAACGGC AAAGAACTCA CCTGCACATT CCCGCTGGAA
GTCGATGCCA CCCTTGTTGA TATGCGCCTC GGAAAAATCT TTGCCGGGTT GTTCAGACCG
CTGCATACCA GCATTGTCAT ACAACTCTCT ACCCCGGTTG ATATAGACAA AAACTGGAAC
CTTGTCACAC GTTTCAGGAT AACCGGATAT ACGTGGAAAA AAAAGCCCCT GCTGCACATC
GGCCCTTTCA GAAAAGATAT GACAACGACC TTTAATCGTC TCATTGAAGA AAAGGGCAGG
AAGCTGACGG CAATGCTTGA CAGGGAAATT CATAAAGAGG TAAGCCTCTA TGCAACGGTT
GCTGACGTAT GGAAAGACCT TCAGGAACCA ATCATCATCA AAAAAAAACA GCCGAAAGCG
TGGCTCAACT TTGAATGCAC AACTCTTGAT GCGTCGATTA CGCTCGATAA GCATGCGATC
ATCTGCACCA CAGGCATCAA TGCCAGGATG CGAATTCTTA CCGACAGCGT CACGGCAAAC
ATCATCCATC CTCTTCCTGT GCTGCAGAAA AATCATACCG CGCAATCCGA CCTTCGATCG
AAGATCTCTC TCTATGCACG CAGCTCATTC AAGGATATCA ACGAACAATT ACAACAGCTG
CTTGAAGGAA AAACATTCAG CAGAGAAGGA CACCATATCA CCATCAGAAA AATCAGAGCC
TACGGGTCTG TCAACGGTTT AACCGTCGAT ATTGTCACGG ACAAAGCATT CGAGGGTCAC
CTTTTCATGA GTGGGAAGCC GGAGTATGAT ACCACAACAA AAAAGATCAT AATCAGAAAC
TTTGACTACG ACCTCACATC AGGAAGCCTG CTGGCCAGGG CGGGAGACGA CCTGCTCCAC
CAGAAAATTC GGGACGAGAT CGCGACAAAA CTCACGCTTA ATCTCGACAG CCTCATCTCA
TCAATCCCTG ATATCGGTCA ACGGGCTATT TCAAAAAGCA AGGCGGGCAA AAGCATCGAC
ATGAGTATAG GAGAACTTGA TATAGAGGCC TGCAGCTTTC TGATAGGAAG AGACAACGTC
CACGCACTCA TCGATGCCAC AACTGAGCTC TCGATTCGCA TCAAACAGAT AAAAACAGGA
AAAGCCATCA CTATAACTGA CGGGTAA
 
Protein sequence
MEMHRTTIQK VFILTAILAL LVAGVFAVLK TYERYRITPP VEVANAITVE VPDSRFQIPV 
IIDLDLLERY INTKLTGTFL TKTIFTGKSK KDEVQVRLSR TDPLSITSNG KELTCTFPLE
VDATLVDMRL GKIFAGLFRP LHTSIVIQLS TPVDIDKNWN LVTRFRITGY TWKKKPLLHI
GPFRKDMTTT FNRLIEEKGR KLTAMLDREI HKEVSLYATV ADVWKDLQEP IIIKKKQPKA
WLNFECTTLD ASITLDKHAI ICTTGINARM RILTDSVTAN IIHPLPVLQK NHTAQSDLRS
KISLYARSSF KDINEQLQQL LEGKTFSREG HHITIRKIRA YGSVNGLTVD IVTDKAFEGH
LFMSGKPEYD TTTKKIIIRN FDYDLTSGSL LARAGDDLLH QKIRDEIATK LTLNLDSLIS
SIPDIGQRAI SKSKAGKSID MSIGELDIEA CSFLIGRDNV HALIDATTEL SIRIKQIKTG
KAITITDG