Gene Paes_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1219 
Symbol 
ID6459585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1328628 
End bp1329308 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content51% 
IMG OID642725209 
ProductProtein of unknown function DUF1847 
Protein accessionYP_002015894 
Protein GI194334034 
COG category[R] General function prediction only 
COG ID[COG4887] Uncharacterized metal-binding protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000101806 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00063854 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGCTG ACAGCAGAAG TGATAAAAAA GCAGATCCTG AGCTAAGTTG TACGTCCTGC 
GGGACCTTGA ATTGTTATCG TCAGGAGAGC CGGTTTCCTG AATTCTGCCA GGGCGAGGCA
GTCGGGCAGG ATGAGATTGA AGGTGTGATT CAGCGGTATT GCGGAGATGA TAAGGATGCC
GTTACAGCAC GGGCCGCAGC TGAAGTTGAA GGGCTGTACT ACGGGAAACT GACACGTGTC
GAAGAGGTCC TTGCGTTTGC CCGGCGTATA GGAGCTATCA GAATCGGGCT TGCTACGTGC
GTTGGTTTGA TTGATGAAAC CAGGGCGTTT TCCAAAATTC TGAAAAAAAA CGGTTTTCAG
CCCTATGCGG TGCTTTGTAA AGTGGGATCC GTTGATAAAT CAGGGATTGG TATCGAGGAT
GCACTGAAAA TAAAGCCGGA TTGTTTCGAG GCGCTCTGCA ATCCTCTGCT GCAGGCAAAG
AGGCTTAACG AGTGGAGGTC TGAACTCAAT GTCGTGATTG GTTTGTGCGT TGGTCATGAC
GCTCTTTTTG CACGCCATTC CGAGGCTCTT GTCACGACCT TGATCGTCAA AGACAGAGTT
CTGGCTCACA ATCCTGCAGC AGCGCTGTAT ACCAGTCATT CGTATTATCA GCGGGTGATG
GAAGAGGGGC GGGAGCTCTG A
 
Protein sequence
MNADSRSDKK ADPELSCTSC GTLNCYRQES RFPEFCQGEA VGQDEIEGVI QRYCGDDKDA 
VTARAAAEVE GLYYGKLTRV EEVLAFARRI GAIRIGLATC VGLIDETRAF SKILKKNGFQ
PYAVLCKVGS VDKSGIGIED ALKIKPDCFE ALCNPLLQAK RLNEWRSELN VVIGLCVGHD
ALFARHSEAL VTTLIVKDRV LAHNPAAALY TSHSYYQRVM EEGREL