| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1213 |
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| Symbol | |
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| ID | 6458402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1319966 |
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| End bp | 1323385 |
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| Gene Length | 3420 bp |
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| Protein Length | 1139 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642725203 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002015888 |
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| Protein GI | 194334028 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000299101 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACATCC CTCTTCTCAA TGAGATCAGA CAGCCGAGAG TGTTGTGGAA TTCTCTCCTG
ATCTTTACCC CTCTGATAGC CATCATCGCT CTTATGAGCG TGCTAATGTA CTCGCAAGAC
AAAGCATTTC ATCTGCTGGA AATCAAGGCT GTCGCAAAAA AAGCCATGTC GGATAAAGAT
CAGTGCCTGT CGAATCAGAC GGTCAATATC ATCAATGACC TGAGGTTCGT TGCCGACCAG
ATAACATATT CCGATCTTAT CAACAAACCG GACGAACAGA AAAACAGGCA ACTCGAACAG
ACCTTGATCA GCCTTGCCAA TGCGAAGAAA AACTATGACC AGCTCCGGTT TATCGACAAC
AACGGCATGG AAATCCTGCG CATCAATTTC GACAGGAATA AGGGCGCCTG GAGTGTCAGC
AAAGAATTGC TGCAAAACAA GCGCGATCGC TATTATTTCC AGAAAGCAAT CATGCTCAAG
CCTTATGCTC TTTACGTCTC TCCTTTCGAT CTCAATATTG AGAACAATGC TGTTGAGCAG
CCGATCAAAC CGACACTTCG TTTTGCCATG CCGGTGGCAG GCTCTAACGG CAAAATAAAA
GGAATCGCGA TCATCAACTA CCTCGGCAAT GAACTGATTG ACAGATTTTC CGAATACGGA
GGCCCGCGCA ACAACAGCCT GATGCTCGTC AATCCTGAAG GATACTTTCT CTACGGATCT
CCTGATGACA ACAACTGGGG ATTTATGTAT CACGATGCAC ATACTAAAAA AACCTTCGCA
GACTATTTTC CCGCTGAATG GAAGACAATC CGGGACAATG AAGAGGGCCA GTTCATTACC
TCTGACGGTC TGTTTACATT CAGAAAAATC TATCCGATAC CGCAGGACGC CGGCACAAAT
GCCCAGAAAT ATTTCTGGAC AACCATCACC CATATTCCAG ATGAAGAACT CCGCAATCTT
CTGCCGGGAG CATCAAGCTA TATACTGTTT ACTGCAATCA CCAGCCTCAT CATACTCACA
ATATCGCTCC TCCTGATGGT TAAGTCTGAA CGAAACCGGA GATCTCGCAA AGCTCTGGAA
AATCTGCACG ATGAGCTCCA GGCACTCTAC GAACATTCTC CAAACCACAT TATCATCTGC
ACACCTGAAG GTGAACTGCA AATGGCAAAC AAGGCCGCCT CAGACTTTCA CGGACTCTCT
TCCGATACCA TCAGGGGGAA AAGATTCAAA GATTTGCTGC CTTCCTCTGT AGCCGATGCC
ATTATCAAAA ACTTACACCA GGTCGCCACA ACACGCAAAC CGGCAGTCAT CCTTGACCGC
ATCAGAAAAG ACGGAACAGT CTATTCATTT CAAAGCGTCG TTTTCCCGAT CTCAGCTGAA
GGTGAAAAAC CGTTTAAACT CGGCATTTCA AGTATCGATC TCACAAAACG TGAAAATGCA
TTGATTCAAC TCCAGGAAAG CCAACGCAAA CTGCAGGCGC TTCTTTCAAA TCTTCCGGGC
ATGGCATATC GATGTCTCAA TACCCCGGAA TGGCCTATGG AATTTGTCAG CGATGGCGCT
TTTGCTTTGA CAGGTTACCG TCCACAGGAA CTCACCGATA TCGTCAACCG TCTTTCATTC
AGCCACCTCA TTGCCAGCAA AGATTGCCTG CGATTATGGC AGGAGGTTCA GGATGCATTA
CAGAAAAAAC AACCCTTCAG TCTCCGCTAC GAACTGATCC AGAAAACAGG AAAACAAATT
CATGTCCATG AACAGGGCTG CGGAGTATAC GATCGTTCAG GAAATCTTAT CGCCCTGGAA
GGATTTATCA TGAACATTAC AGATCAGGTT CTCTTCCAGA AGCAAATTCA GGAAAAAGAA
GCCCGGTTCA GAACACTTTT TGAAGGAGCC CCCGATGCCA TTTTTCTTGC AGATTGTTCA
ACAGGTATTA TTACCGGAGT CAACCGCAAA GCCTCGGAAC TTCTGGGAAA GGAACTGCCT
GAAATTGTAG GCAAACATTT CACGACACTG CATTGGCCGG ATGAGCGGCA CATCGCCGAA
GCAGCCTTCA TTGCCGCTCG GCAAATCGCA TCGACAGCAG ACGCCACAAG CCAGCCGCAA
CAATTCAACG TTCTGCACAA AAGCGGCAGA AAAATCCCTG TTGAGATCAT CTCTCAGAAA
ATTCAACTGG GCAACAGAGA AATATTCTAC GGCACATTCC GCGACATAAC CCTTCGCAGA
CAAGCAGAAG AAGCCCTTCA GGCAAAAACA CTTCTGCTCG AAACGGTCAC AGGATCCCTG
CCTGCCTATA TATCCATGAA AGACCGCAAC CTACGCTATA CCTATGCAAA CAGTTATGCG
CTGAATAAAT TTGACCTCAC ACCCGAAGAG GTCAAAGGCA AGTGCGACGC AGACCTCTTT
CCTCATCAGC TTGCAACGCT CTACAGTGCT GATGACCGTG AAGTGCTGGA AACAACGACT
CCTCTGATCA ACAAGGAGGA GGAACTCGCA CTACCCGATG GGACAGTCAT TCCTGTCCTG
ACCAATAAAA CGCCGCTGAT CAGCAATAAT ACAGTTAAAG GAATCGTCTG CGTTTCAATG
GACCGCACAG AACAGAAAAA AGTAGAAGAA AAAACCAAAA CGCTTCAAAC GCAGCTCCAC
AACAGTCAAA AAATGGAAAC TCTGGGAACG CTTTCCGGCG GCATAGCCCA CGATTTCAAC
AATATTTTAA CCCCTATCAT CGGCTTTACC GAGATAGCTA TCCGATCGCT GCCATCGGAA
AGCGAGACAA TAAAAGACCT CGATACGGTA CTGAGAGCGG CACGAAGAGC AAAAAAGCTT
GTTCAACAGA TGCTCACCTT CAGCAGAAAG GATCCTCCAA GGCTCGTCAT TCAACCCCTG
TCGCCTATCG TTGAAGAATC ACTCGATCTC ATGCAACCAA GTATTCCTGA AAAGGTATCA
CGTGAAATCG ATATCGAACC ATTCCAGGAA ATGGTCCTTT GCGATGCTGC TCAGATAGAG
CAGGTCATCA TCAACCTCTG TACCAATGCC CTGCAGGCAA TGGATAAGGA GAACGGGACA
CTGCGGATCA GCCTGAAAAA AAAGAAGATC ACAAACAAAA ATATCGTCAT GTGCGGTGCC
ATTGAACCGG ATAAAGACTA TGCGCTCTTC ACGGTCGGTG ATAGCGGCAG GGGCATGAGC
GAAGAAGAAC GAAAAAAAAT GTTCGACCCG TTTTTCACAA CCAAACCGGC GGGAAAAGGA
ACCGGACTCG GACTATCGGT CGTCTACGGC ATCATTGAGG AGCACAATGG CGCAATATCG
GTACAGACAC GCAAAGGATC AGGCTCGGAG ATAACAATCT ATATCCCGCT TCTGGAAGAC
ACAGAACAAC CGGAAAAAAC GCTATCATCA TTACGATCTA ATAAATCAAA ATCGATATGA
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| Protein sequence | MNIPLLNEIR QPRVLWNSLL IFTPLIAIIA LMSVLMYSQD KAFHLLEIKA VAKKAMSDKD
QCLSNQTVNI INDLRFVADQ ITYSDLINKP DEQKNRQLEQ TLISLANAKK NYDQLRFIDN
NGMEILRINF DRNKGAWSVS KELLQNKRDR YYFQKAIMLK PYALYVSPFD LNIENNAVEQ
PIKPTLRFAM PVAGSNGKIK GIAIINYLGN ELIDRFSEYG GPRNNSLMLV NPEGYFLYGS
PDDNNWGFMY HDAHTKKTFA DYFPAEWKTI RDNEEGQFIT SDGLFTFRKI YPIPQDAGTN
AQKYFWTTIT HIPDEELRNL LPGASSYILF TAITSLIILT ISLLLMVKSE RNRRSRKALE
NLHDELQALY EHSPNHIIIC TPEGELQMAN KAASDFHGLS SDTIRGKRFK DLLPSSVADA
IIKNLHQVAT TRKPAVILDR IRKDGTVYSF QSVVFPISAE GEKPFKLGIS SIDLTKRENA
LIQLQESQRK LQALLSNLPG MAYRCLNTPE WPMEFVSDGA FALTGYRPQE LTDIVNRLSF
SHLIASKDCL RLWQEVQDAL QKKQPFSLRY ELIQKTGKQI HVHEQGCGVY DRSGNLIALE
GFIMNITDQV LFQKQIQEKE ARFRTLFEGA PDAIFLADCS TGIITGVNRK ASELLGKELP
EIVGKHFTTL HWPDERHIAE AAFIAARQIA STADATSQPQ QFNVLHKSGR KIPVEIISQK
IQLGNREIFY GTFRDITLRR QAEEALQAKT LLLETVTGSL PAYISMKDRN LRYTYANSYA
LNKFDLTPEE VKGKCDADLF PHQLATLYSA DDREVLETTT PLINKEEELA LPDGTVIPVL
TNKTPLISNN TVKGIVCVSM DRTEQKKVEE KTKTLQTQLH NSQKMETLGT LSGGIAHDFN
NILTPIIGFT EIAIRSLPSE SETIKDLDTV LRAARRAKKL VQQMLTFSRK DPPRLVIQPL
SPIVEESLDL MQPSIPEKVS REIDIEPFQE MVLCDAAQIE QVIINLCTNA LQAMDKENGT
LRISLKKKKI TNKNIVMCGA IEPDKDYALF TVGDSGRGMS EEERKKMFDP FFTTKPAGKG
TGLGLSVVYG IIEEHNGAIS VQTRKGSGSE ITIYIPLLED TEQPEKTLSS LRSNKSKSI
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