| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1210 |
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| Symbol | |
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| ID | 6459274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1315373 |
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| End bp | 1316542 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642725200 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002015885 |
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| Protein GI | 194334025 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00968103 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACTTT CTACAACACA GAAAATTGTT GCCGGGGTGA CGGTTGTCGT CATCGCTATC
CTGTTCATCC TGATGATGCC GGCTCCATTG CCGGTTGATA CCGAAATCGT TCGGCGAGGA
GTATTGACGG TGAGGCTTGA AGGAGAGGGC AGGAGCAGGG TAAAGGAGCG TTTTACGATA
TCATCGCCGG TGAATGGCAG GCTTGAGAGG ATTCTCCTGG ACGAAGGAGA CTCTGTTACA
AGCAATGCCG TTGTAGCCCG CATCACCCCT CCATCGCTCA ATACCCGTGA GTACACAAGG
GCCGAGGCCG CAATGCGTTC TTCGGAAGCT GCTCTGGGAG CTGCCGGTGC TCGAGAGCGA
CAGGTAAAGG TTGATCTTGA ACAGGCCCGT CGGAAATATG ATCGTTATAC TGTTCTTTTT
GAGCAGGGAG CGGTGTCGAA AGAGGAGTAT GAAGAGGTCA AAGCCACCAG GGATATGCTT
GCCAAAGAGT ACAGTGCTGC CACGATGACG ACCCGTTCAT CCCGGTTTGA TGTTGATGCT
GCTCGAGCAG TTGTTGATTC TGCGCTTGAG GGCTCTTTTT TCGAAGTGCG TTCTCCCCGT
GACGGTCTTG TTCTGAAGAT ACTTGAAAAG AGTGAGCGCA TCATTGCGGC AGGAACGCCT
CTGGTCGAAA TTGGCGATGC CCATGATATC GAACTGGTGA TAGATGTGCT TTCATCAGAT
GCGGTCAAGG TCGCTCCGGG TATGCAGGTC GTTATCGAGG AGTGGGGCGG TGGATCTGCT
CTTCAGGGTC GTGTGCGCTT TATCGAGCCT GCAGCGGTAA CCAAAATTTC CTCTCTCGGG
ATTGAGGAGA AGCGGGTAAA TATTATTATT GACCTCGATG AGCCGGAGAG GAGGCTGGGA
GATAATTACC GGGTACAGGC CGACATTGTT CTCTGGCGGG GAGACAATGT TTTGCAGGTT
CCTGTCAGCA GTCTTTTTCG TGGCGACGAG GACTGGGAGG TGTTTACGGT ACGTCGCGGC
AGGGCTATTG TGCAGCCGGT CACTATCGGG CGGAGAGGGG CCTATGAAGC CGAAGTGATC
GATGGGGTTC GGGAGGGGGA TCTTGTTGTT GTCCATCCGA CCAATGATCT TGAAGATGGC
ATGAGAGTCA AGACTCTCAA GGGTCGCTGA
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| Protein sequence | MKLSTTQKIV AGVTVVVIAI LFILMMPAPL PVDTEIVRRG VLTVRLEGEG RSRVKERFTI
SSPVNGRLER ILLDEGDSVT SNAVVARITP PSLNTREYTR AEAAMRSSEA ALGAAGARER
QVKVDLEQAR RKYDRYTVLF EQGAVSKEEY EEVKATRDML AKEYSAATMT TRSSRFDVDA
ARAVVDSALE GSFFEVRSPR DGLVLKILEK SERIIAAGTP LVEIGDAHDI ELVIDVLSSD
AVKVAPGMQV VIEEWGGGSA LQGRVRFIEP AAVTKISSLG IEEKRVNIII DLDEPERRLG
DNYRVQADIV LWRGDNVLQV PVSSLFRGDE DWEVFTVRRG RAIVQPVTIG RRGAYEAEVI
DGVREGDLVV VHPTNDLEDG MRVKTLKGR
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