Gene Paes_1199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1199 
Symbol 
ID6459567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1305356 
End bp1306162 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content49% 
IMG OID642725190 
Productthioredoxin 
Protein accessionYP_002015875 
Protein GI194334015 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0450617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAACG AACAGTTTGA TTTTAGCTGT GATGTTCTTG AGCAAAGTCA TGACATTGCG 
GTTCTTGTTG ATTTCTGGGC GGAATGGTGT GGCCCATGCC GTATGCTTGC CCCTGTTCTT
GAAAGCGTTG TCGCACGATT CAATGGCAAG GTTGTGCTTG TCAAAATCAA TACGGAAGAA
CATCCGGCAG TTGCGCAAAA ATTCAATATC AGGAGCATTC CCAACGTCAA GCTGTTTATT
GACGGAAAGG TTGCCGATGA ATTTACAGGA GCCCTTCCTG AAGCCCAGAT TGAGCAGTGG
CTACGCAAAG CATTGCCAAG CCCCTATACC GGTGAGATCA GGCTTGCCAG GGGATTGGGC
CAACAGGGCA AGCAACAGCA GGCGATCTCC ATTCTTGAGG AGGTTTTGCT CAACGAGCCG
GACAATATCG AGGCAACGGC CTTGCTGGTT AGGCTTACGC TGTTTACAAA GCCGACTGAG
GCGGGCAAGC TCATCGGGAG GCTCGAAGGG GAGTCGGAAT ACGCTGAATT TGCCGGATCG
GTCAGGGAGC TTGTTTCGAT GCTCGTTAAA AAGATTGATG AACTTCCCGA GGACCATGTT
CGGGATCGAT ATGCAGCAGC TCTTCTTCAA TTGCAGGCGC AGGATTTTAA TGCCGCTCTG
GACGGATTTA TCAAGGTAAT AAAGGAGAAC AGGTACTATG ATGATGATGG TTCCCGAAAA
GCCTGTATTG CGATTTTCAA GTACCTGGGC GAGGATCACA CGGTAACCTT GAAGCATCGC
AGAGTTTTTG ATCGGGCGCT CTATTGA
 
Protein sequence
MDNEQFDFSC DVLEQSHDIA VLVDFWAEWC GPCRMLAPVL ESVVARFNGK VVLVKINTEE 
HPAVAQKFNI RSIPNVKLFI DGKVADEFTG ALPEAQIEQW LRKALPSPYT GEIRLARGLG
QQGKQQQAIS ILEEVLLNEP DNIEATALLV RLTLFTKPTE AGKLIGRLEG ESEYAEFAGS
VRELVSMLVK KIDELPEDHV RDRYAAALLQ LQAQDFNAAL DGFIKVIKEN RYYDDDGSRK
ACIAIFKYLG EDHTVTLKHR RVFDRALY