Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1184 |
Symbol | |
ID | 6458820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1293319 |
End bp | 1295205 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642725175 |
Product | Chloride channel core |
Protein accession | YP_002015860 |
Protein GI | 194334000 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0945746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.895336 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGATT CCTCGAACAT AAATGGTAAA TGGAACAGGA AATTCCTTGC CGTTTTTTAT GATTTTTTTC GCAAAAGCCG CTATTTCCAG GGATCGTCTC AGAAGTATTT CAGATTGACC CTGGACAATG TTCTTCTCCA TCTCAACCTC AATCAGGATC TTCCTTTTTT ATTCGTGGCC GTGTTCATTG GTATTACGAC CGGCTATGTC GCTGTCGTAT TTCACGACGC GATCAAGTTC CTCAGTCATT TTTTCTTTGG TGGTATCGAG GCTTTCGGCA CATCCATTCT CATTGACGAA TACTGGTTTT TTTTTATGCC GCTCGTTCCG GCAGCGGGGG GGCTGCTGGT GGGGTTGTAC AATGTGTATG TTGTTAAAAC AACCCAGCCC GGCCATGGGC TTGCAAGCGT GATCAAGGCA GTCGCGCAGA ACAATGGCAT CATTGGCAGG AATCTCTGGC TGCATCGTAC GATCACTTCT GTTCTCACTA TTGGTACCGG GGGTGGCGGA GGCCGAGAGG CCCCGATAGC CCAGGTAGGG GCGGCTCTTG GTTCCTCGGT CGCCCAGATG CTGAAATTTT CTCCCGACAG AACAAGAACC CTGCTTGGCT GCGGAGCTGC GGCCGGGCTG GCGGCGGTAT TTAACGCGCC TCTCGGGGGT GTGATGTTTG CCATCGAGGT TATTCTCGGG GATTTCAGCG TGCGTACCTT CAGCCCGATC GTTATTGCCG CTGTGATCGG TACCGTTGTT TCCCGCGGTT ATCTCGGTAA TTCCCCTACC TTCCAGGTTC CCGACTACAG TCTTGTTTCA AATTCTGAAC TGGTTTTTTA CTTCTGTCTC GGTGTCCTGG CCGGACTGTC CGCTGTTTTG TTCATTAAGA TGTATTACCG AATAGAGGAG GGATTTCAGA CGATCCGCAA GAAGCATAAC ATTCCTCTCT GGGCTATGCC CGCCATAGGA GGGCTTCTCA GCGGTCTTAT CTGCATGTGG TTGCCGGGGC TCTATGGTTA TAGCTACGAA GCGATCGACA ATGCTGTGCG GGGGACCGAG TCGTGGATCA CTATGGCCGG GATCTATTTT CTCAAGCCCG TTGTTGCCGG GTTGAGCGTT GGCTCGGGCG GCTCGGGCGG CATGTTTGCA CCGGCAATGA AGATGGGCGC AATGCTGGGA GGCATGTTCG GCAATCTGGT GCACTATCTT TTTCCTGCTA TCACAGCGGC ATCAGGCGCC TACGCACTGG TCGGCATGGG GGCTTTGACT GCCGGTATCA TGCGTGCGCC GTTGACGGTT ATTCTGATTT TGTTTGAAGT GACCGGCGAG TATGAGATTG TGTTGCCGAT CATGTTCGCC GCGGTTACTG CCGCCCTGAT TGCACGTCTT GCCTACAGTT ATTCTATGGA AACCTATGTG CTCGAGAAAG AGGGGGTTCG CGTAGGCTAT GGTATTGCGC TTTCAGTCGC AGAGAATATC AGTGTCCTTG ATGTCATGAG AACGAACTAT GTCCGTTTTC GTGATGTTAC CAGGGCTGAT AAGATTGTCG ATGTGTTTCA TAATACGCCG GAATCGAATT TTCTTGTCAC CAATGAAGCT AACGAGTTTG TTGGCATTAT CAGGCTTGAC GAGATGAGCA TTCTTTTGAA GGAGGGGATG TTTACCGGTC TTATCGCAGA GGATATTGTC AAGAAAGAGG TTCCTGTTCT TTATGATACC TCGAAACTCG ATGAGGCACT GAAGCTCTTT GAACTTTCCG ATTACGATAT TCTTCCCGTG CTGTCCCAGA AGTCATCCGA GCTGCTCGGG GTTGTCAGGC AGGAACAGGC CTTCTCCTAT TATCGTAAAC AGATGAACCT CTACGGTTCC GATCTTGATG CCAAGCAGTC AGGCTAA
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Protein sequence | MKDSSNINGK WNRKFLAVFY DFFRKSRYFQ GSSQKYFRLT LDNVLLHLNL NQDLPFLFVA VFIGITTGYV AVVFHDAIKF LSHFFFGGIE AFGTSILIDE YWFFFMPLVP AAGGLLVGLY NVYVVKTTQP GHGLASVIKA VAQNNGIIGR NLWLHRTITS VLTIGTGGGG GREAPIAQVG AALGSSVAQM LKFSPDRTRT LLGCGAAAGL AAVFNAPLGG VMFAIEVILG DFSVRTFSPI VIAAVIGTVV SRGYLGNSPT FQVPDYSLVS NSELVFYFCL GVLAGLSAVL FIKMYYRIEE GFQTIRKKHN IPLWAMPAIG GLLSGLICMW LPGLYGYSYE AIDNAVRGTE SWITMAGIYF LKPVVAGLSV GSGGSGGMFA PAMKMGAMLG GMFGNLVHYL FPAITAASGA YALVGMGALT AGIMRAPLTV ILILFEVTGE YEIVLPIMFA AVTAALIARL AYSYSMETYV LEKEGVRVGY GIALSVAENI SVLDVMRTNY VRFRDVTRAD KIVDVFHNTP ESNFLVTNEA NEFVGIIRLD EMSILLKEGM FTGLIAEDIV KKEVPVLYDT SKLDEALKLF ELSDYDILPV LSQKSSELLG VVRQEQAFSY YRKQMNLYGS DLDAKQSG
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