Gene Paes_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1180 
Symbol 
ID6459786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1289347 
End bp1289763 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content48% 
IMG OID642725171 
Productmembrane protein of unknown function 
Protein accessionYP_002015856 
Protein GI194333996 
COG category[S] Function unknown 
COG ID[COG1950] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.746825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCACG CCAGGCCTTT ACTTTTAGCG ATGAAAAACA TTACCTTACA CAACGAACCA 
TTAAATGAAA AAACCATGGC TAACATTCTG CTTCTATGGC TGATCAATGC CTTGTCAGTC
TATGCCACGG CCAGCCTGCT CAGTGGCATC TCTGTCAGGA GTTTCGGCGC TGCACTTCTG
GTTGCGCTGG TACTTGGATT GATCAATGCG CTCCTGAAAC CGGTACTGAT CTTTTTCTCA
ATTCCGTTCA TCGTCGTGAC GCTGGGTCTC TTCCTGCTTA TCATCAACGC ACTGATGCTG
CAACTGGCAG CAGCGATCGT CGGGGGTTTC TATGTCAGCT CGTTTGGCTG GGCAGTTCTC
GGCTCAATCG TCATCAGTAT CGTCTCCTGG CTTCTCAGTT CTCTTTTCAA CATATAA
 
Protein sequence
MIHARPLLLA MKNITLHNEP LNEKTMANIL LLWLINALSV YATASLLSGI SVRSFGAALL 
VALVLGLINA LLKPVLIFFS IPFIVVTLGL FLLIINALML QLAAAIVGGF YVSSFGWAVL
GSIVISIVSW LLSSLFNI