| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1162 |
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| Symbol | |
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| ID | 6460151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1270494 |
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| End bp | 1271111 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642725153 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002015838 |
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| Protein GI | 194333978 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.771224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGCTAA AAAAAGAAAA ATACAGCTGG TCGAAGTGGG CTATTGTTAA AAAAATTGCC
AATGTGCTGC ATGCAACATC GTTTTTTTTG AAGAACAGGC TGCTGCTGGG AACGTTTTTT
TCTGCAGTAC GGAAGATCGG TATACGATAT GCGATTGCTG AGCTGTATTA TAAAAAAGGT
CTGAGAAAAA GCCGGGAGGG AGACTATAGC GCAGCTGCCA CGCTTTTTTC AAGGGCTCTC
GATTTTCATC CGGGCCACAC CAACGCCTAT TTCAGCAGGG GCCTTATCCG GACAAGACGG
GGAGACAATC CTGGTGCGCT TGCTGATTAC AGCAGGGTCA TCGAACTCTA TCCGGATGTA
TCGATGGTTT ACAACAATAG AGGAATGGTG CGCAAAAAGA CAGGTGACCA GAACGGGGCT
CTTCAGGATT TTAATAAAGC GATAGAGCTT GATCCTGCCA ATCCTTCGGC CTATTTTAAC
AGGGGACTGA TTAAGATTGA GGGTCGGATG GATGCCCGTG CACTGGCCAA TATCGTTCAG
GCAGCACGTC TTGGCAATGA CGAAGCGCGG ACGTGGCTCG AAAATAGCGG ATATCGATGG
GAGTATGATT GCAATTGA
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| Protein sequence | MRLKKEKYSW SKWAIVKKIA NVLHATSFFL KNRLLLGTFF SAVRKIGIRY AIAELYYKKG
LRKSREGDYS AAATLFSRAL DFHPGHTNAY FSRGLIRTRR GDNPGALADY SRVIELYPDV
SMVYNNRGMV RKKTGDQNGA LQDFNKAIEL DPANPSAYFN RGLIKIEGRM DARALANIVQ
AARLGNDEAR TWLENSGYRW EYDCN
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