| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1160 |
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| Symbol | |
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| ID | 6459590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1264615 |
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| End bp | 1267809 |
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| Gene Length | 3195 bp |
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| Protein Length | 1064 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642725151 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_002015836 |
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| Protein GI | 194333976 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.87087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.737588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACG GTTCAATTAC CTTTATCAGT GCTGGTGCAG GTTCTGGTAA AACTACCCGT
TTGACAAGCA TTCTCTATGA AAAGCTTCTC AGCGGAGAAG CTCGCCCCGA TGCCATACTC
GCGACTACCT TTACGACGAA AGCTGCCGGA GAGCTCAAGG ATCGCGTTCG AGCTATGCTT
CTGCATCATA AACGAGATGA TCTTGCTGCA GCTATTGCCG AATCGCGTAT CGGAACGGTC
AACAGCGTCT GCGGCGGGCT CTTGAAGCGA TTTTCGTTTG AACTGGGCCT TACGGTCGAT
CAACGGATTC TCGATGAAAA AGCCGCTTTG GTCCAGATAT CCAGAGCGAT TGACATCGCG
GTCGGTGTCT CGCATCTTGA ACGTATCACC GCGCTTTCGC GCCGGCTTGG CGTTACCAAC
CGTCAGACCG GAGAGCCGGC CTGGAAAGAG CATGTCAAGG CAATTATCGA CGAGGCCCGC
TACAACGGCA TCTCTGCCGA ACATTTTGAG GAATTTGCCG TCAGCAATGC AGACGAGCTT
CTTGCTCATT TTCCAGCACC GCTCGAAGAA GAACCGGATG AGGAACTGTT GCGATCGATC
AATCTGCTCA AACCAGCTAT CCTGGAGGCC CTGACGGTCA AGACACAGAA GAACACTGCC
TCGTATCTCA ACGAACTGGA GCGTTTCGCT CGTTGTCTTC AGGCGGGAAC ATGTTCATGG
GCAGAATGGC TGAAAATCGC AGAGGCCAGA CCGCAGAAAT CTCTGCATGA CAATGTAGCG
AGGGTTGCCG GGCTTTCGGC GTCCGTTGCA GCCCATCCCC GTCTGCATCA GGATATCAGG
GCATACCTGA AGCTTGTTTT CAGTGTTGCA GGAATGACAC TCGGCGTCTA TCAGCAGTTG
AAGCACGAGT CCGGGATGAT CGACTTTGCC GATCAGGAAG CCGGTCTTCT CGACGCGCTG
GATCATCCTG ATGTGCAGGA GGCGCTGCAG GAAAAACTCG ACCTGCTGCT TGTCGATGAG
TTTCAGGACA CAAGTCCACT GCAGCTTGCC CTTTTTGTCA AGCTGTCGCA GCTTGCCCGG
CGAACATACT GGGTAGGCGA TATCAAACAG GCAATTTATG GTTTTCGCGG AGGCGATGCG
CGACTGATGA AAGCGGTGCT GGATATCGTG CCGCAAGAGT GCCGTGAGGT ACTGGGGGAT
TCCTGGCGTT CGGTGCCTTC CCTGGTCGAA GCGGTCAACG ATCTGTTTTC GGAGACTTTT
TCAGAACAGG CAGGCACGAC GATCGATATT TCGCTTTCTC CGCAGAGGGA GGAGCATCCC
TCACAGATCT CCTCTTTTCG CTGGGATCTC GGCAGAGGAA AACTCGAAGA GCAGTATGAT
GCACTGTCGG CCGGGATCGG GCGCCTTCTG GATGAGCGTT ATCAGGTGTT CGATAAAGGC
TGCAATGTCT GGCGCGATGT TTCCTTCGCT GACATAGCAG TACTTGCCAG AACCAACGCT
CATGTCCGCG ATATCGCCCG CGTGCTGAAC CGCAATTCGA TCCCGTCAGC AACTGTTCAG
CCCGGTTTGC TGGCTACACC GGAGGCTGTT CTTGTCATGG CAGCATTGCG GCGGGTTCTT
GATCCTTCCG ATACCGTCGC CACTGCAGAA ATCTATTCGC TCGTGACCTC TTGTGATCCT
GAGGAGTGGC TTCAGCACAG GTTGCGTTAT ATCCGATCGG GGCATGACAA GTCGTTGTGG
ATGGAAACCG GCGACGATGC TCACCCTGCG CTGCAGGCTG TTGCCGGACT TCGGGCCCAT
GCAGCTCTTT TTTCGCCATC CGAAGCCCTT CAGGCAGTGA CTGCAGCAGT CGGTGCAGCA
GAGCATGTTC AGGCCTGGTG CCGCAACAGT GATGAAGCGC GTATCCGCCT CATGAACCTT
GATACTCTAT TGGAGTTTGC CCGACGTTAT GAGGAAGAGA GTGCCGCTTC CTGGCAAGCA
GTGAGTATAT CCGGACTTTT GAACTGGCTG GCAGACCTTG CCCGGGATGA ACTGGATCTG
TTTGCCGAAC CTCCTGTCAA CGCAGTGAGG GTTACGACCT ACCATAAATC CAAAGGACTG
GAGTGGCCGG TGGTTATTCT GCTCGATCTT GACAGCACCA GCGATGCGCT CATCAGTCAT
CCTATGGTGG TCAGCAGCCG AAAACTCGAT GCCCGCGATC CACTTCGTGA TCGTCGGATT
CGGTTCTGGC CGTCGCCTTT CGGATCGGCA AAAGGGTTTG CCGGGATTGA TGCCGTTCTG
CAGAGCGATG TTCTGCAGGA GGCCCAAACC CTTGCCGGAG AGGAGGCAGC AAGGCTTTTT
TATGTTGCCG CCACACGGGC AAGAGATTGC CTGGTCTTTG CCGTGCCATC AAAAGCCCGC
TCTTTTTCAT GGCTCGCATC AGCTGGCGCT GAATGTCTGA TCGACGTTCA TGACGATGCT
ATCCGGCTTC CGGGCGGAAG ATCGCTGGCC TGCAGGCGTT GGGACGATCT TGCCGCTACG
GTTCCTGCAG TCAGACCCGG CGTCAGGGAG GAACCGCTCT CCTGGATCAG CCAGCCCACT
GCTTCGGAGG TGTTCTATGC CGAGAATATT TCACCGTCCC GCATTACTGC AAATGATGGC
GTTATGGCTG TTGTTGAAGA GGTTGTCTAT GATTCTGATT CCTGTCACAT CAAAGGATCT
GTTGATATGA GCGTGCTCGG GACTGCTGTG CATGAAGTCC TTGCTTTCGC TCTGGTCCAG
GATGACGGGG TGTGCACTCC TCATCATATC AGGGATATTC TGGCTCGATA CGGCCTGTCC
GGCAGAATGG ATTCCGAGGC TTTATACCGT CGCCTGCGTC GCTTCAGGGC ATGGCTTGCC
ATGAGGTGGC CGGAAGGGAC TCTTCATGTC GAGATGCCAG TACAGCATGT TCAGCCTGAC
AGACGGGTTC TCAAAGGTCA GATTGATCTG CTTGTTGCGG TCAATGAGCG GTGGGTGATT
ATCGACCATA AATCGATGGA CAGGGATATC GATCTTCTGA GATCCAAAGC CCTTGACTAT
ACGGGACAGC TTCAGGCCTA CAGTCACGCC CTTGAGGCGG TTACCAGTCA GTGTGTCGAA
GAATCCTGGG TGCATTTTGT CGCGGCAGGG CGCATGGTGC GCCTTTCATC ATGCAACGAT
CAGACTGCAG TATAG
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| Protein sequence | MKNGSITFIS AGAGSGKTTR LTSILYEKLL SGEARPDAIL ATTFTTKAAG ELKDRVRAML
LHHKRDDLAA AIAESRIGTV NSVCGGLLKR FSFELGLTVD QRILDEKAAL VQISRAIDIA
VGVSHLERIT ALSRRLGVTN RQTGEPAWKE HVKAIIDEAR YNGISAEHFE EFAVSNADEL
LAHFPAPLEE EPDEELLRSI NLLKPAILEA LTVKTQKNTA SYLNELERFA RCLQAGTCSW
AEWLKIAEAR PQKSLHDNVA RVAGLSASVA AHPRLHQDIR AYLKLVFSVA GMTLGVYQQL
KHESGMIDFA DQEAGLLDAL DHPDVQEALQ EKLDLLLVDE FQDTSPLQLA LFVKLSQLAR
RTYWVGDIKQ AIYGFRGGDA RLMKAVLDIV PQECREVLGD SWRSVPSLVE AVNDLFSETF
SEQAGTTIDI SLSPQREEHP SQISSFRWDL GRGKLEEQYD ALSAGIGRLL DERYQVFDKG
CNVWRDVSFA DIAVLARTNA HVRDIARVLN RNSIPSATVQ PGLLATPEAV LVMAALRRVL
DPSDTVATAE IYSLVTSCDP EEWLQHRLRY IRSGHDKSLW METGDDAHPA LQAVAGLRAH
AALFSPSEAL QAVTAAVGAA EHVQAWCRNS DEARIRLMNL DTLLEFARRY EEESAASWQA
VSISGLLNWL ADLARDELDL FAEPPVNAVR VTTYHKSKGL EWPVVILLDL DSTSDALISH
PMVVSSRKLD ARDPLRDRRI RFWPSPFGSA KGFAGIDAVL QSDVLQEAQT LAGEEAARLF
YVAATRARDC LVFAVPSKAR SFSWLASAGA ECLIDVHDDA IRLPGGRSLA CRRWDDLAAT
VPAVRPGVRE EPLSWISQPT ASEVFYAENI SPSRITANDG VMAVVEEVVY DSDSCHIKGS
VDMSVLGTAV HEVLAFALVQ DDGVCTPHHI RDILARYGLS GRMDSEALYR RLRRFRAWLA
MRWPEGTLHV EMPVQHVQPD RRVLKGQIDL LVAVNERWVI IDHKSMDRDI DLLRSKALDY
TGQLQAYSHA LEAVTSQCVE ESWVHFVAAG RMVRLSSCND QTAV
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