| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1159 |
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| Symbol | |
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| ID | 6459592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1263234 |
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| End bp | 1264466 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642725150 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_002015835 |
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| Protein GI | 194333975 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.067261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.815946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTC TGCATACATC GGACTGGCAT ATTGGCGCAA TGCTCTACGG CCGGAAGCGC
TACGAAGAGT ATGAACGCTT CCTTGACTGG ATGGTCATGA CGGTTGAATC CGAATCGGTT
GACCTGCTCA TGATCGCCGG AGATATCTTT CACACAACGA CACCCGGCAG CAGAGCGCAG
TCGCTCTATT ACAATTTTCT TGACCGCATT GCGGCTTCCA GCTGTCGTCA TGTGGTCATA
ATCGCAGGTA ATCATGATTC CCCTTCGCTG CTCGACGCTC CGCGTGCGCT TCTCCGGGCT
CTGGATATCC ATGTCTCAGG AACCGCTTCT GCTGATCCTG CCGATGAGGT TATCGTGCTG
AACCGTGCAG ATGGTGAGCC GGAAGCAGTT GTTTGCGCTG TGCCGTATCT CAGGGACCGC
GACATCAGAC TTGCCGGAGC GGGGGAACAC GGTGAAGAGA AAACACAGCG TCTCATCGAT
GCCATTACAG CTCATTACGC ACTGGTCTGT GATGCAGCCG AAGCTCGACG CCGTTCGATT
GGTCAGGATA TCCCCCTTCT TGTCATGGGT CATCTTTTTG CTGCGGGAGG TGTCACAGCC
GACGGTGATG GTGTTCGTGA AATCTATGTC GGCTCTCTGG CAAGAGTGCC TGTTCAGGCC
TTTCCTCCTG TGATAGACTA TCTTGCTCTG GGGCATCTGC ATGCGTCCCA GCGTCTTGCT
GGAAAAGAGT GTATGCGTTA CAGCGGAGCA CCTCTTCCTA TGGGATTTGG TGAGGCTGCC
CGGTCAGGAA AGATTGTCCT CGGGGAAACC TCGGGAAGGG AGATCTCTAT CAAAGAGATT
GACGTTCCCT GTTTTCAGCA TCTTGAACGG TTAGAAGGGA CTTTCGAAGA GCTAACTCTT
GCACTGCAGG CCATGCGGCA GCAAGCCTCC GGAAGCGTAT GGATTGAAAT TGATTACAAG
GGATCGATGC CGGCAGGAAG TCTGCGAGAG GAGCTTGATG CGATTGTCGA GGGAAGCCAA
ATCGAGATTC TCAGGATAAG GAACCTTCGG GTGACCGATA TCATGCTTGA GCAGATGGAG
CAGGATGAGG AACTTGACGA TCTCTCCGAA GAGGAGGTTT TTTCCCGTTG CATGGATAGC
TGTGACGTTC CCGCTGATGA GCAGAGGTAC CTTATGCAGG CCTATCGGGA AATTCTCTGT
TCCCTTCACG AAGAAGACCG GATGGAGGAG TAG
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| Protein sequence | MKFLHTSDWH IGAMLYGRKR YEEYERFLDW MVMTVESESV DLLMIAGDIF HTTTPGSRAQ
SLYYNFLDRI AASSCRHVVI IAGNHDSPSL LDAPRALLRA LDIHVSGTAS ADPADEVIVL
NRADGEPEAV VCAVPYLRDR DIRLAGAGEH GEEKTQRLID AITAHYALVC DAAEARRRSI
GQDIPLLVMG HLFAAGGVTA DGDGVREIYV GSLARVPVQA FPPVIDYLAL GHLHASQRLA
GKECMRYSGA PLPMGFGEAA RSGKIVLGET SGREISIKEI DVPCFQHLER LEGTFEELTL
ALQAMRQQAS GSVWIEIDYK GSMPAGSLRE ELDAIVEGSQ IEILRIRNLR VTDIMLEQME
QDEELDDLSE EEVFSRCMDS CDVPADEQRY LMQAYREILC SLHEEDRMEE
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