| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1148 |
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| Symbol | |
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| ID | 6459165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 1251054 |
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| End bp | 1251608 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642725139 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002015824 |
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| Protein GI | 194333964 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000777294 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.187122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCCAA TTGATCAGGA TATTTCGCAA CGCTTCAGGA ACGGAGATCC CGACGCTCTT
CACGCGGTGG TGACCTGTTG CCAGAATACC GTTTTCAGGA TTGGCCTCAA ACTGTTCGCC
AATCAGGACG ATGCGAAGGA TTTCTGTCAG GATGTTTTTC TGCACGCTTT TGAAAAGAGA
GGCCGCTATG ATCCGAAACG CCCTTTAGAG CCCTGGTTAT ACCGCGTGGC TTTAAATTTC
GGTCGAGGAA GGCTGCGCAG AAAACGAAGC TTGTCGTTGA TCGATGCCGA TGCTTTTCAG
CATGTCGATG ACAGAGCGGT TCGGGATCTG GTTGAAGAGG AGAGACGAGT TGCTGTGCAA
AAATCTCTCA TGCAGCTCAA ATCCAACTAT CGCGAGTGTT TACTTTTGCG CTTCGAGTGC
GATCTGAAGC TGGAGGAGAT AGCCGGGGTT CTGGAGATAC CTCTCAGTAC GGTGAAAACC
CGGTTGCGCA GGGCAATGGC CGCTTTTAAA GAACGCTATA TCGCTGATGG AGGAGACTAT
GCTGATGAAC TGTAA
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| Protein sequence | MNPIDQDISQ RFRNGDPDAL HAVVTCCQNT VFRIGLKLFA NQDDAKDFCQ DVFLHAFEKR
GRYDPKRPLE PWLYRVALNF GRGRLRRKRS LSLIDADAFQ HVDDRAVRDL VEEERRVAVQ
KSLMQLKSNY RECLLLRFEC DLKLEEIAGV LEIPLSTVKT RLRRAMAAFK ERYIADGGDY
ADEL
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