Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1137 |
Symbol | |
ID | 6459987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1241316 |
End bp | 1242146 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642725128 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_002015813 |
Protein GI | 194333953 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.463886 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGTCT CAGACAATCT TGTCGATCTT TTCAGAAACT TTTCCATAGA TATCTTGCTG CAGATCGTAC TCATCGGCAG TGTATCATGG CTTCTGATTA CGCTCTTTTC CAAATGGGTT CCAATCCTTG CCAACACAAT ATCCGGCCGG TTCCGGTTTC GGCTGCTTGC GCTCGTGCCA ATTTTCAGAC TGGGGGTATT TATCGCAGCA CTGTTGCTTA TCCTCAACCG GGTCATAGAA CCGCAGATTG AAAACATCAT CGCGCTGATA AGCCTTCTCG GTCTGGGTCT TGGCTTCGCA TTCAAGGATT ATGTCAGCAG TCTTATAGCA GGCGTGGTAA CCCTTTATGA AACGCCATAC CGCCCAGGGG ATTGGATCGA GGTTGAGGGA GCGTATGGCG AAGTCAGGGC GATCAATCTC CGCAGCGTGG AAATCGTCAC GCCGGACAGT ACCGTGGTTA TCATCCCGCA TCTGAAAATA TGGAATCAGC TTCTTTTCAA CGCTAATGAC GGTCGCCGGC AACTGCTGTG TGTCGCAGAT TTTTACCTCC ATCCTGATCA CAACGGAAGG GAGGTTCAGA ATATTCTCTA TGACGTTGCT TCGACAAGCG CTTACCTGCA GGCGGACCAG CCAATCAGGG TGGTCGTCCA TGAGCAGCTA TGGGGAACAC ACTACAGGCT CAAGGCCTAC CCGATTGATC CAAGGCAGCA GTTCGAGTTC ATAACGGACC TGACCATCCG CAGCAAAGAG ATTCTTGCTG AAAAAGGCAT CCGGTTTGCC TCAGCACCAG CGATTTCGCA AGAGAACAAC CTTTCGAGCA AAACGGCTTG A
|
Protein sequence | MNVSDNLVDL FRNFSIDILL QIVLIGSVSW LLITLFSKWV PILANTISGR FRFRLLALVP IFRLGVFIAA LLLILNRVIE PQIENIIALI SLLGLGLGFA FKDYVSSLIA GVVTLYETPY RPGDWIEVEG AYGEVRAINL RSVEIVTPDS TVVIIPHLKI WNQLLFNAND GRRQLLCVAD FYLHPDHNGR EVQNILYDVA STSAYLQADQ PIRVVVHEQL WGTHYRLKAY PIDPRQQFEF ITDLTIRSKE ILAEKGIRFA SAPAISQENN LSSKTA
|
| |