Gene Paes_1137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1137 
Symbol 
ID6459987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1241316 
End bp1242146 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content50% 
IMG OID642725128 
ProductMscS Mechanosensitive ion channel 
Protein accessionYP_002015813 
Protein GI194333953 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.463886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCT CAGACAATCT TGTCGATCTT TTCAGAAACT TTTCCATAGA TATCTTGCTG 
CAGATCGTAC TCATCGGCAG TGTATCATGG CTTCTGATTA CGCTCTTTTC CAAATGGGTT
CCAATCCTTG CCAACACAAT ATCCGGCCGG TTCCGGTTTC GGCTGCTTGC GCTCGTGCCA
ATTTTCAGAC TGGGGGTATT TATCGCAGCA CTGTTGCTTA TCCTCAACCG GGTCATAGAA
CCGCAGATTG AAAACATCAT CGCGCTGATA AGCCTTCTCG GTCTGGGTCT TGGCTTCGCA
TTCAAGGATT ATGTCAGCAG TCTTATAGCA GGCGTGGTAA CCCTTTATGA AACGCCATAC
CGCCCAGGGG ATTGGATCGA GGTTGAGGGA GCGTATGGCG AAGTCAGGGC GATCAATCTC
CGCAGCGTGG AAATCGTCAC GCCGGACAGT ACCGTGGTTA TCATCCCGCA TCTGAAAATA
TGGAATCAGC TTCTTTTCAA CGCTAATGAC GGTCGCCGGC AACTGCTGTG TGTCGCAGAT
TTTTACCTCC ATCCTGATCA CAACGGAAGG GAGGTTCAGA ATATTCTCTA TGACGTTGCT
TCGACAAGCG CTTACCTGCA GGCGGACCAG CCAATCAGGG TGGTCGTCCA TGAGCAGCTA
TGGGGAACAC ACTACAGGCT CAAGGCCTAC CCGATTGATC CAAGGCAGCA GTTCGAGTTC
ATAACGGACC TGACCATCCG CAGCAAAGAG ATTCTTGCTG AAAAAGGCAT CCGGTTTGCC
TCAGCACCAG CGATTTCGCA AGAGAACAAC CTTTCGAGCA AAACGGCTTG A
 
Protein sequence
MNVSDNLVDL FRNFSIDILL QIVLIGSVSW LLITLFSKWV PILANTISGR FRFRLLALVP 
IFRLGVFIAA LLLILNRVIE PQIENIIALI SLLGLGLGFA FKDYVSSLIA GVVTLYETPY
RPGDWIEVEG AYGEVRAINL RSVEIVTPDS TVVIIPHLKI WNQLLFNAND GRRQLLCVAD
FYLHPDHNGR EVQNILYDVA STSAYLQADQ PIRVVVHEQL WGTHYRLKAY PIDPRQQFEF
ITDLTIRSKE ILAEKGIRFA SAPAISQENN LSSKTA