| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1120 |
|---|
| Symbol | |
|---|
| ID | 6459942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 1227448 |
|---|
| End bp | 1227912 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642725115 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_002015800 |
|---|
| Protein GI | 194333940 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.447774 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.302876 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATTG ATCAGAGAAA AGCGACAGAT ATCTTCGACG ATGTGTACAC ACTTGCCTAT
TGGATGACGA AATCTTTGGA GGAAACTCAT GAACTGTTCA GGAAAACCTA TCAGAAAGCA
GGTTCTGACG CAGCAGAGAT CGATGTGTTC AAAGCATTCA GAGAAGCGTA TTTCGAGATG
TATGAAATCA ACGAATCAAG CAGAGTGGAA GCTGCTTCTC CTATAGACCA GGCTCTTTTC
ATCCTTCGCA GACAGGATGC AGACAGAAAA TTTTCTGTAC TGCTTTCTGA CACATGCGGA
ATCCGATACC GGACCATAGC AAAGATTACA GGCAACCCTC TGTCCATGAT CAGGTTATGG
TTATCCAACG GAAGAAAATG GCTTCTCAAT AGTATGATCA TGCTCTTTTC GATGATCAAT
CTCGACCAGA ATACCAAGGA AAGCCTCCTG CTTCTGCCGA TATAA
|
|---|
| Protein sequence | MPIDQRKATD IFDDVYTLAY WMTKSLEETH ELFRKTYQKA GSDAAEIDVF KAFREAYFEM
YEINESSRVE AASPIDQALF ILRRQDADRK FSVLLSDTCG IRYRTIAKIT GNPLSMIRLW
LSNGRKWLLN SMIMLFSMIN LDQNTKESLL LLPI
|
|---|
| |