Gene Paes_1113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1113 
Symbol 
ID6460632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1222188 
End bp1222751 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content48% 
IMG OID642725108 
Productcell wall hydrolase SleB 
Protein accessionYP_002015793 
Protein GI194333933 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.289482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAT TGAAACGCGT TGTCAAGCAA CTCCCTGGTG CTTTGCAGGG AAATAAAATG 
AAAACATTCG GCAACATTTT ATTTCTGACT GGTTTTTTCT CAATGGGCCT TTTTATGAAA
AGCCTTATTA TCGGCGCCCA TAAACCCCAG AACGAATACT CCTACAAAGA TTACGTCAAG
TCCTTCAACA GTCAGGACAT CGAGTGGCTT GCCCGCAATA TCTATCATGA AGCGAGAGGA
GAGTCATGGG AGGGAATGCT TGCTGTTGGC GTGGTAACGC TCAACAGGGT CGCATCGCCT
CACTATCCCG ATACCATAGA AGGCGTTGTC AAGGATTACA AGCAGTTCAG CTGGTACTGG
GACGGGATGC CGGATACCAT CAGGGACAGG CGGGCCTGGA AAAAAGCCAA AGCGGCAGCA
GCTGCGGTGC TTTTTAACAG CGACCTCTCA GTAGCCGAAA CGCTCAAGGA CGCCAAGCAT
TATCATGCCG TCTACGTGGA CCCTTACTGG GCAGATACAA AAAACCAGAT AACGACAATC
GGCAAACATA CCTTCTATCT GTGA
 
Protein sequence
MKQLKRVVKQ LPGALQGNKM KTFGNILFLT GFFSMGLFMK SLIIGAHKPQ NEYSYKDYVK 
SFNSQDIEWL ARNIYHEARG ESWEGMLAVG VVTLNRVASP HYPDTIEGVV KDYKQFSWYW
DGMPDTIRDR RAWKKAKAAA AAVLFNSDLS VAETLKDAKH YHAVYVDPYW ADTKNQITTI
GKHTFYL