Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1113 |
Symbol | |
ID | 6460632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1222188 |
End bp | 1222751 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642725108 |
Product | cell wall hydrolase SleB |
Protein accession | YP_002015793 |
Protein GI | 194333933 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.289482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAT TGAAACGCGT TGTCAAGCAA CTCCCTGGTG CTTTGCAGGG AAATAAAATG AAAACATTCG GCAACATTTT ATTTCTGACT GGTTTTTTCT CAATGGGCCT TTTTATGAAA AGCCTTATTA TCGGCGCCCA TAAACCCCAG AACGAATACT CCTACAAAGA TTACGTCAAG TCCTTCAACA GTCAGGACAT CGAGTGGCTT GCCCGCAATA TCTATCATGA AGCGAGAGGA GAGTCATGGG AGGGAATGCT TGCTGTTGGC GTGGTAACGC TCAACAGGGT CGCATCGCCT CACTATCCCG ATACCATAGA AGGCGTTGTC AAGGATTACA AGCAGTTCAG CTGGTACTGG GACGGGATGC CGGATACCAT CAGGGACAGG CGGGCCTGGA AAAAAGCCAA AGCGGCAGCA GCTGCGGTGC TTTTTAACAG CGACCTCTCA GTAGCCGAAA CGCTCAAGGA CGCCAAGCAT TATCATGCCG TCTACGTGGA CCCTTACTGG GCAGATACAA AAAACCAGAT AACGACAATC GGCAAACATA CCTTCTATCT GTGA
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Protein sequence | MKQLKRVVKQ LPGALQGNKM KTFGNILFLT GFFSMGLFMK SLIIGAHKPQ NEYSYKDYVK SFNSQDIEWL ARNIYHEARG ESWEGMLAVG VVTLNRVASP HYPDTIEGVV KDYKQFSWYW DGMPDTIRDR RAWKKAKAAA AAVLFNSDLS VAETLKDAKH YHAVYVDPYW ADTKNQITTI GKHTFYL
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