Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1110 |
Symbol | |
ID | 6458653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1219088 |
End bp | 1220002 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642725105 |
Product | putative ABC transport system, lipoprotein |
Protein accession | YP_002015790 |
Protein GI | 194333930 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.318737 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCTT GTAACACCAC ACGACGTTTC TTCTCCCTGC TCCTTTTTCT TCTGCAAGCA ATTGTTATTA CCGGATGCAA CCGGGAAAAG AAGTCTGACG GATATGGGAA TTTCGAGGCA ACGGAAATCA TCGTTTCGGC AGAAGCTTCC GGCAGACTCC TTTCGTTCAG CGCTGTTGAA GGAGAAGAGA TCAAAGACGG AAACATGGCA GGAGTGATCG ACACCACACA ACTGCATCTG CAGATAGAGC AGGTGAAGGC ACAGATACAA TCATTGCAGG CCAGGCAGGA AACCATCCGT TCACAGATGG ACGTGCTCGG TCAGCAGAAA ACGAACGCAG CAAGGGAGGT GCAGCGCTTT GAAAAACTTG TTCAGGCAGA TGCCGTACCC CGCAAACAAC GTGACGACGT TCTTGATCAG TATCGGGTTA TCGAAAAGGA AATTCTTGCA ACCGCATCTC AACAGGAAAG CATCGATGCC GATATTCTTT CACTCAACGT CCGGATTCGT GAGCTGGATG ACAGAATCGA CAAAAGCATC GTACGAAACC CCGTGAAGGG AACCGTTCTT GTGACCTATG TCGAACCTGG CGAAATAGTC TCCTACGGTC AGCCGCTCTA CAGCATTGCC AACCTTGACA GCATGTTTCT CCGGGTCTAC CTTGACGGCA CCCAACTTCC GCATATCAGC CTTCGACAAC CGGTAACGGT GCTCTTCGAC AATGACAGCA GAACGAACCA GTCGAAAGAG GGGCGGATTG CGTGGATTTC CTCAAAGGCT GAGTTTACCC CGAAAATCAT CCAGACGAAA CAGGATCGCG TTACCCTTGT CTATGCAGTC AAAATCAGTG TTCCGAATGC AGACGGCTCG TTGAAAATCG GTATGCCGGG CGAAGTGGTC TTTTCCCGTC AGTAA
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Protein sequence | MPACNTTRRF FSLLLFLLQA IVITGCNREK KSDGYGNFEA TEIIVSAEAS GRLLSFSAVE GEEIKDGNMA GVIDTTQLHL QIEQVKAQIQ SLQARQETIR SQMDVLGQQK TNAAREVQRF EKLVQADAVP RKQRDDVLDQ YRVIEKEILA TASQQESIDA DILSLNVRIR ELDDRIDKSI VRNPVKGTVL VTYVEPGEIV SYGQPLYSIA NLDSMFLRVY LDGTQLPHIS LRQPVTVLFD NDSRTNQSKE GRIAWISSKA EFTPKIIQTK QDRVTLVYAV KISVPNADGS LKIGMPGEVV FSRQ
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