Gene Paes_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1110 
Symbol 
ID6458653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1219088 
End bp1220002 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content50% 
IMG OID642725105 
Productputative ABC transport system, lipoprotein 
Protein accessionYP_002015790 
Protein GI194333930 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.318737 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCTT GTAACACCAC ACGACGTTTC TTCTCCCTGC TCCTTTTTCT TCTGCAAGCA 
ATTGTTATTA CCGGATGCAA CCGGGAAAAG AAGTCTGACG GATATGGGAA TTTCGAGGCA
ACGGAAATCA TCGTTTCGGC AGAAGCTTCC GGCAGACTCC TTTCGTTCAG CGCTGTTGAA
GGAGAAGAGA TCAAAGACGG AAACATGGCA GGAGTGATCG ACACCACACA ACTGCATCTG
CAGATAGAGC AGGTGAAGGC ACAGATACAA TCATTGCAGG CCAGGCAGGA AACCATCCGT
TCACAGATGG ACGTGCTCGG TCAGCAGAAA ACGAACGCAG CAAGGGAGGT GCAGCGCTTT
GAAAAACTTG TTCAGGCAGA TGCCGTACCC CGCAAACAAC GTGACGACGT TCTTGATCAG
TATCGGGTTA TCGAAAAGGA AATTCTTGCA ACCGCATCTC AACAGGAAAG CATCGATGCC
GATATTCTTT CACTCAACGT CCGGATTCGT GAGCTGGATG ACAGAATCGA CAAAAGCATC
GTACGAAACC CCGTGAAGGG AACCGTTCTT GTGACCTATG TCGAACCTGG CGAAATAGTC
TCCTACGGTC AGCCGCTCTA CAGCATTGCC AACCTTGACA GCATGTTTCT CCGGGTCTAC
CTTGACGGCA CCCAACTTCC GCATATCAGC CTTCGACAAC CGGTAACGGT GCTCTTCGAC
AATGACAGCA GAACGAACCA GTCGAAAGAG GGGCGGATTG CGTGGATTTC CTCAAAGGCT
GAGTTTACCC CGAAAATCAT CCAGACGAAA CAGGATCGCG TTACCCTTGT CTATGCAGTC
AAAATCAGTG TTCCGAATGC AGACGGCTCG TTGAAAATCG GTATGCCGGG CGAAGTGGTC
TTTTCCCGTC AGTAA
 
Protein sequence
MPACNTTRRF FSLLLFLLQA IVITGCNREK KSDGYGNFEA TEIIVSAEAS GRLLSFSAVE 
GEEIKDGNMA GVIDTTQLHL QIEQVKAQIQ SLQARQETIR SQMDVLGQQK TNAAREVQRF
EKLVQADAVP RKQRDDVLDQ YRVIEKEILA TASQQESIDA DILSLNVRIR ELDDRIDKSI
VRNPVKGTVL VTYVEPGEIV SYGQPLYSIA NLDSMFLRVY LDGTQLPHIS LRQPVTVLFD
NDSRTNQSKE GRIAWISSKA EFTPKIIQTK QDRVTLVYAV KISVPNADGS LKIGMPGEVV
FSRQ