Gene Paes_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1107 
Symbol 
ID6458988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1216280 
End bp1217386 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content50% 
IMG OID642725102 
ProductABC-2 type transporter 
Protein accessionYP_002015787 
Protein GI194333927 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.502812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTT TTGCCGCATT CATGACCAAG GAGTTCTATC ACATTCTGCG CGACCGGCGC 
AGTGCAATGA TCCTCTTTGG TATGCCGATC ATTCAGCTGC TGCTGTTCGG CTATGCCATC
CGCAATGAAA TCCAGACTGT AAGAATTGCT ATCATCGATC AATCGCACGA CCGGATAACC
GAAGCAATAA CCGATAAACT GCTCTCTTCA GGCCACTTCG TTCTTGTCGA TACGTTCTCA
TCGGACGATG CCATCGAAGA AGGGTTCAAG TCAGGCGAGA TCACTGAAGC GATTGTTTTT
GAAGCAGGTT TCGGTCGTCG TTTCGTCAGG GAGCAGGAAA CGTCGGTTCA GATCATTACC
GATGGGTCGA ACCCGAACCT TGCCCGCATT GTGCTCAGCT ATACAACGGC TGTCTTCATG
GATTACCGGG CATCTCTCCT TCAGGGAGAT GAAGAAGGCA AGGGTATAGC AGCCGAAACA
CTGATGCTCT TCAACCCTGA GCTGAAAAGC GTCTACCTGT TCGTTCCAGG ACTGATAACC
GTTATTCTCA TGCTGGTTTC AGCCCTGATG ACGTCGATCA GCATCACAAG AGAAAAAGAG
ACCGGCACCA TGGAAGTCCT CCTGGTTTCA TCACTGAGAC CCTACCAGAT CATTATCGGC
AAGGTCGTTC CATATCTGAT GCTGTCGTTT ATCAATGTCG TGACAGTGCT GATCATTGCA
AGGTTTGTCT TCGGGGTTCC TTGCCGGGGC AGTGTCACGC TCCTGCTTCT CGAATCGCTT
CTCTTTATTC TTACCGCGTT ATCTCTTGGT ATTTTCATTT CAACAATAAC CTCATCGCAG
CAGGTGGCGA TGATGATCTC ACTCGGGGGA TTGCTCCTGC CGACGGTGAT GCTGTCAGGC
TTTATTTTTC CCGTTTCAAG TATGCCTCTG CCGCTTCAGA TCATCAGCAC TCTGATCCCG
GCACGGTGGT TTCTGGTGAT TGTTCGCGGC ATTATGCTCA AAGGGACCGG CATCGTCTAT
TTCTGGCAGG AGACCCTGGT TCTTGCTTCA ATGACCCTTG CGCTCGGAAT CCTGAGCATC
AGGAAGTTCT CCATACGATT GACCTGA
 
Protein sequence
MNSFAAFMTK EFYHILRDRR SAMILFGMPI IQLLLFGYAI RNEIQTVRIA IIDQSHDRIT 
EAITDKLLSS GHFVLVDTFS SDDAIEEGFK SGEITEAIVF EAGFGRRFVR EQETSVQIIT
DGSNPNLARI VLSYTTAVFM DYRASLLQGD EEGKGIAAET LMLFNPELKS VYLFVPGLIT
VILMLVSALM TSISITREKE TGTMEVLLVS SLRPYQIIIG KVVPYLMLSF INVVTVLIIA
RFVFGVPCRG SVTLLLLESL LFILTALSLG IFISTITSSQ QVAMMISLGG LLLPTVMLSG
FIFPVSSMPL PLQIISTLIP ARWFLVIVRG IMLKGTGIVY FWQETLVLAS MTLALGILSI
RKFSIRLT