Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1107 |
Symbol | |
ID | 6458988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1216280 |
End bp | 1217386 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642725102 |
Product | ABC-2 type transporter |
Protein accession | YP_002015787 |
Protein GI | 194333927 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.502812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGTT TTGCCGCATT CATGACCAAG GAGTTCTATC ACATTCTGCG CGACCGGCGC AGTGCAATGA TCCTCTTTGG TATGCCGATC ATTCAGCTGC TGCTGTTCGG CTATGCCATC CGCAATGAAA TCCAGACTGT AAGAATTGCT ATCATCGATC AATCGCACGA CCGGATAACC GAAGCAATAA CCGATAAACT GCTCTCTTCA GGCCACTTCG TTCTTGTCGA TACGTTCTCA TCGGACGATG CCATCGAAGA AGGGTTCAAG TCAGGCGAGA TCACTGAAGC GATTGTTTTT GAAGCAGGTT TCGGTCGTCG TTTCGTCAGG GAGCAGGAAA CGTCGGTTCA GATCATTACC GATGGGTCGA ACCCGAACCT TGCCCGCATT GTGCTCAGCT ATACAACGGC TGTCTTCATG GATTACCGGG CATCTCTCCT TCAGGGAGAT GAAGAAGGCA AGGGTATAGC AGCCGAAACA CTGATGCTCT TCAACCCTGA GCTGAAAAGC GTCTACCTGT TCGTTCCAGG ACTGATAACC GTTATTCTCA TGCTGGTTTC AGCCCTGATG ACGTCGATCA GCATCACAAG AGAAAAAGAG ACCGGCACCA TGGAAGTCCT CCTGGTTTCA TCACTGAGAC CCTACCAGAT CATTATCGGC AAGGTCGTTC CATATCTGAT GCTGTCGTTT ATCAATGTCG TGACAGTGCT GATCATTGCA AGGTTTGTCT TCGGGGTTCC TTGCCGGGGC AGTGTCACGC TCCTGCTTCT CGAATCGCTT CTCTTTATTC TTACCGCGTT ATCTCTTGGT ATTTTCATTT CAACAATAAC CTCATCGCAG CAGGTGGCGA TGATGATCTC ACTCGGGGGA TTGCTCCTGC CGACGGTGAT GCTGTCAGGC TTTATTTTTC CCGTTTCAAG TATGCCTCTG CCGCTTCAGA TCATCAGCAC TCTGATCCCG GCACGGTGGT TTCTGGTGAT TGTTCGCGGC ATTATGCTCA AAGGGACCGG CATCGTCTAT TTCTGGCAGG AGACCCTGGT TCTTGCTTCA ATGACCCTTG CGCTCGGAAT CCTGAGCATC AGGAAGTTCT CCATACGATT GACCTGA
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Protein sequence | MNSFAAFMTK EFYHILRDRR SAMILFGMPI IQLLLFGYAI RNEIQTVRIA IIDQSHDRIT EAITDKLLSS GHFVLVDTFS SDDAIEEGFK SGEITEAIVF EAGFGRRFVR EQETSVQIIT DGSNPNLARI VLSYTTAVFM DYRASLLQGD EEGKGIAAET LMLFNPELKS VYLFVPGLIT VILMLVSALM TSISITREKE TGTMEVLLVS SLRPYQIIIG KVVPYLMLSF INVVTVLIIA RFVFGVPCRG SVTLLLLESL LFILTALSLG IFISTITSSQ QVAMMISLGG LLLPTVMLSG FIFPVSSMPL PLQIISTLIP ARWFLVIVRG IMLKGTGIVY FWQETLVLAS MTLALGILSI RKFSIRLT
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