Gene Paes_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1100 
Symbol 
ID6459842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1208193 
End bp1208972 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content54% 
IMG OID642725095 
Productconserved hypothetical transposase 
Protein accessionYP_002015780 
Protein GI194333920 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00213813 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATAG AAGAAGCACA TGGAAACGGA GCCCGTTACA GCAAGGCCTG TGAGGTTGTT 
GGGATCTCTC ATCGCACCCT CCAGCGCTGG AAGCAATGTG GCCTGAAAGA CCGACGCAAA
GGGTCACAGA AAACCGTTGT GAGAAAGGTT CCTCAGGAAA CCAGGGATGA AATCATCAAT
GTCTGTAACG AGCCTCGGTT CCGGGATCTG ACACCGTATG AAATCGTGCC CCAGCTTCTG
GAAGAAGGCC GCTATCTGGC TTCAGAACGA ACGATCTACC GTATCCTGAG GAAAGCTGAT
CAGGTGCACC ATCGGAGTGA GCTGCGCGTC GGTCACCGTC ATGCCAAGCC GCCGGAACGC
AAGGCTACAG GCCCGAATCA GGTGTACACA TGGGACATCA CCTATATGGG GCGTACGGTA
AGAGGCCTAT TCTATTACGC GTATGTTGTC AAGGATCTCT TTGACAGATC CATCGTCGGC
TGGGCGGTTC ACGAAGAAGA AAGCGAAAAG CACAGCCGAG CTCTCTTCGC CCGGATACTG
AACGGAGGCA AGGTAAAACT CAAGGCGCTT CACGCTGATA ACGGTCACCC GATGAAAGGT
GATACGCTGA TGGCCCTTCT GCAAAAGCTC AATGTTGCAG TCTCGCACAG CAGGCCACGG
ACCAGCAATG ACAACCCCTT CGTGCGACGT GAAAGTCGCA TAGTTGAACT GTTCTTTGAA
CCAGTTGTGC CGTCAACTGC TCCCACCGGC ACATGCAGAG GGAGTAATCC TTCTGTGTGA
 
Protein sequence
MLIEEAHGNG ARYSKACEVV GISHRTLQRW KQCGLKDRRK GSQKTVVRKV PQETRDEIIN 
VCNEPRFRDL TPYEIVPQLL EEGRYLASER TIYRILRKAD QVHHRSELRV GHRHAKPPER
KATGPNQVYT WDITYMGRTV RGLFYYAYVV KDLFDRSIVG WAVHEEESEK HSRALFARIL
NGGKVKLKAL HADNGHPMKG DTLMALLQKL NVAVSHSRPR TSNDNPFVRR ESRIVELFFE
PVVPSTAPTG TCRGSNPSV