| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1078 |
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| Symbol | |
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| ID | 6459583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1187260 |
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| End bp | 1188558 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642725075 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002015760 |
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| Protein GI | 194333900 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00831826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCAAT CTTCAGAAAC CTTTAACAGG AACCTTCATT TTAAGGCTGT TGTTGTCGCA
GGAGTTATCT GTTCGATGCT GTTGCTTGTC GGAACAGCAG GATTTCTGTT TTACCAGACA
AGACTGCAGC AAAGAGCTGA TGAGATTCAG ACCTTGTATA AGGATCTGCT TGATTTCCGA
TCTATGCTGA CCAAACTGCA GCTGGCTGAA GAACGCCCTG AAATTTTCAG GAAAGTCATT
CAGAATACAA CGCCTGTCAC GTTGCATTCA CTCAATTATC CTGAGCTTGG AGAACAGTCA
AGGCTTTCGG AAATAGCCCA TTGGCTTCAA TCCCAGCACA GCATGCTCGA AAAGATGCTC
CGGGAAATAG AAATGCAGAA AAGCGGCGCT GAGGGTATCA TTTCACGCAA AATCCTTCAG
CTCGACGAGG TCATGCTCCA GGTCTCTCTG GAACTGCATC ACGCTCATGA ACAGACATCG
GGCACTATCC AGTTCTTTTT ATTTATCGTG CTCCTGATTC TGTTGCTTTT TTCGGGAGGA
GCAACAACAC TGATCATAAA AAATTACAGG CAAACCGTTA TCCCGCTCAA CAGGCTTGCA
GGAACCCTCC TGCAGTTCAA CAAGGACCTT CCGGAAAGCA TTCACGATAC CGCTGAAGAT
GTCAAAAAGA GCTGCCCAAA GGATTGCTTT TCCAGTGATA TCAACCGTGT TACTGAAACT
ATCGTGACTT TTTGTCAGGA TCTGGAAATG AAAAACAGGA AGCTCGATGA ACTTTTCATT
AAAGATGAGA AAACGAATCT GTATAATTAC CGTCATTTCA AGGAGCATCT TATCGGCGAT
GTCGCACGCG CAAAACGCTA TAATGATCTC GTTTCCCTTG CCATGCTTGA TATTGATCAT
TTTAAAGCCT ACAATGATGC CAACGGTCAC ATTGCCGGCG ACCGTGTCTT GCAGCGAATC
GCAGAGATCA TCCTTGAAGA GTGCCGTCAT ACCGATATGC CTGCTCGCTT CGGGGGAGAA
GAGTTTGCCA TTTTGTTTCC CCGTACCGAT GCAGCCCAGG CCAGGGGTAT CGTGGTTCGC
CTGATGGAGG TCATTTGCGC AGAACCTTTT GAACGGGAAC GCAATCAGCC CGGCGGAAGG
CTGACCATTA GCGCTGGGAT CGCCACCTTT CCGCATGATG CGCAGGGGTG GTATTCGTTG
ATCAACAATG CCGACAGGGC ATTGTATGAA TCCAAATCGA CAGGAAGAAA TAAAGTTATC
AATTATGAAG AGATCAGGAC GGAGGGTTCT CTAAGTTGA
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| Protein sequence | MRQSSETFNR NLHFKAVVVA GVICSMLLLV GTAGFLFYQT RLQQRADEIQ TLYKDLLDFR
SMLTKLQLAE ERPEIFRKVI QNTTPVTLHS LNYPELGEQS RLSEIAHWLQ SQHSMLEKML
REIEMQKSGA EGIISRKILQ LDEVMLQVSL ELHHAHEQTS GTIQFFLFIV LLILLLFSGG
ATTLIIKNYR QTVIPLNRLA GTLLQFNKDL PESIHDTAED VKKSCPKDCF SSDINRVTET
IVTFCQDLEM KNRKLDELFI KDEKTNLYNY RHFKEHLIGD VARAKRYNDL VSLAMLDIDH
FKAYNDANGH IAGDRVLQRI AEIILEECRH TDMPARFGGE EFAILFPRTD AAQARGIVVR
LMEVICAEPF ERERNQPGGR LTISAGIATF PHDAQGWYSL INNADRALYE SKSTGRNKVI
NYEEIRTEGS LS
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