Gene Paes_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1065 
Symbol 
ID6459394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1174793 
End bp1175614 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content50% 
IMG OID642725062 
Producttransglutaminase domain protein 
Protein accessionYP_002015748 
Protein GI194333888 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.681603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.333108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACTCA AGGTTGAGCA TACCACATTG TTTCAATACG ATGCTCCTAT CTATGAAACG 
GCGACCGAGG TTCGTCTCCA TCCTGCCAGT GTTATGGGCG GGCAGCAATG CGTGAATTTC
AATCTTGAGC TTCAGCCTGA AGCTTCATTT TTTGATTATA CCGATTTCTA TGGCAATAAG
GTGCACCATT TCAATATTCT GCAGAGTCAC AGGGACGTTG AAATCGTTGC GACGTCGGTT
GTCGAAACCG CTCCTCCGGC CAATAAAGAG AGTCTTTGTG AAAATGAGAT CTATCTGATG
GATTTCAGCG GTCAGAGTCG CTATGTCCAT TTTGATCCTG CGCTGACAAG ATTTGCCGAT
GAGTTCAGGG AGTGTAACAA TGCCCTGGAG CAGGCTACGG CAGTATGCCG GCATATTAAC
ACCATATTCG AGTATGAGCC AGGCGTTACC GATGTGCATA GCACAAGCGC GGTTGTTATT
GCTCTGGGTC GAGGCGTTTG TCAGGATTTC GCCCATGTGA TGATTGCCGT TTGCCGAAAT
CTTGGTATTC CGGCCCGCTA TGTCAGCGGT TACCTCTATG GTGGCGGCAG TACACCTGAC
GGTCAGGACG AGGCAAGTCA TGCATGGTGC GAAGTATTTT GCGGGCCACA ATACGGGTGG
AGAGGCTTTG ACCCGACCCA CAAGACACTG TTTGTGGATG AGCGCTATAT TAAGATCGGT
TCGGGACGCG ATTACGCCGA TGTTCCTCCT GTCCGGGGAA CATGGAAAGG CGTTGCTTCG
GAGCAACTGA GTGTTTCAGT TCGGGTCAGT TCACTTGAAT AA
 
Protein sequence
MILKVEHTTL FQYDAPIYET ATEVRLHPAS VMGGQQCVNF NLELQPEASF FDYTDFYGNK 
VHHFNILQSH RDVEIVATSV VETAPPANKE SLCENEIYLM DFSGQSRYVH FDPALTRFAD
EFRECNNALE QATAVCRHIN TIFEYEPGVT DVHSTSAVVI ALGRGVCQDF AHVMIAVCRN
LGIPARYVSG YLYGGGSTPD GQDEASHAWC EVFCGPQYGW RGFDPTHKTL FVDERYIKIG
SGRDYADVPP VRGTWKGVAS EQLSVSVRVS SLE