| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1058 |
|---|
| Symbol | |
|---|
| ID | 6459350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 1165936 |
|---|
| End bp | 1167126 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642725056 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002015742 |
|---|
| Protein GI | 194333882 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3973] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0139648 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATTG ATCGCACACG CCGATTCACA CTTCCGGGAA TCCATGAACT GAACAAGGAT
CAGGATGAGG CGCTGGCATT GCCATTGGAG GGGCAACACC TGATTATTGG TGGTCCCGGA
ACTGGTAAGT CAGTTGTTGC GCTGTTACGG GCGCGACGTC TCTCGGAGAA GGATAAGACT
TACCAAACTC TCGTATACAA TCACTTACTG AATCATTCAA ACCGGCATTT GTTTGGTAGT
GAACAGTCAT TCTCGGCCAA AACCTGGGAG ACCTGGTTTC GAGATATTTA CAAATATTTT
TTAAAATCCG TTCCGACACT TGAACCTGAT TATCCTGGAG GATATCGGCC AATAGACTGG
AATGCCGTCG AACTCGAGGT TCAGTCTTTG GGCAATATTC CAGATCAAAG CGATAAGTTT
ATCGTTATCG ATGAGGGGCA GGATATGCCA CCCGCCTTTT ATCAAACGCT AGCCCATCTG
GGCTTCGAGA ATTTCTACGT GGCTGCCGAC CAGAACCAGC AGATTCACCC CGACAAATGT
AGCTCACGCC AAGACATCGA AAATTCGCTG GCTATTGAAG CTGGCGACAC GCTGGAACTG
AAGACCAACT ACCGGAACAC GCGCCCTATC GCGCTGTTCG CCCAGCACTT TTATCCAGCT
GATCAGGCAA GTCCAAAACC AGACCTACCT GATTTTCAAC CGGCTGCCGC GACGCCGGAG
TTGTGGACTT ATGGTACGGC AAATACAACG ACATTGGCCT CGATTGCAAA CAATATCCTC
CGGTTAAGCG ACCGTAATCC ACGCAAACTC ATTGGCATCA TTACTCCCGA CAATAAAGTA
CGGATGAAAT TCAATGACGC GCTTAGTCTT GCCAATCCAA GGTTGGACAA TGACAAACCT
TCGATTCAGA CATTTGTTTC CGGCCAGCAG CAGTTGCCGG ATTTCACTCA GGGCGGCATC
ATGATCATAA ATGCTCAGTC TTGTAAAGGT CTGGAGTTTG ATACTGTCAT CCTGGCTGAT
ATCGACCAAC ATCAACCCAA ATCTAATCCG TATGTGCTCA AGGCACGGTT TTATGTCATG
GTAGCGCGTG CCCGAGAGCA GGTGATTGTG CTACGTACCG AGAACACTTG TCGAATCGTT
GAAAGTCTGC TTCCCACTGA TTCGGCTAAC CTTATCAGGA AAAAGCAATG A
|
|---|
| Protein sequence | MPIDRTRRFT LPGIHELNKD QDEALALPLE GQHLIIGGPG TGKSVVALLR ARRLSEKDKT
YQTLVYNHLL NHSNRHLFGS EQSFSAKTWE TWFRDIYKYF LKSVPTLEPD YPGGYRPIDW
NAVELEVQSL GNIPDQSDKF IVIDEGQDMP PAFYQTLAHL GFENFYVAAD QNQQIHPDKC
SSRQDIENSL AIEAGDTLEL KTNYRNTRPI ALFAQHFYPA DQASPKPDLP DFQPAAATPE
LWTYGTANTT TLASIANNIL RLSDRNPRKL IGIITPDNKV RMKFNDALSL ANPRLDNDKP
SIQTFVSGQQ QLPDFTQGGI MIINAQSCKG LEFDTVILAD IDQHQPKSNP YVLKARFYVM
VARAREQVIV LRTENTCRIV ESLLPTDSAN LIRKKQ
|
|---|
| |