Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1043 |
Symbol | |
ID | 6459960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 1145917 |
End bp | 1146600 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642725043 |
Product | putative signal transduction protein with CBS domains |
Protein accession | YP_002015729 |
Protein GI | 194333869 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000177571 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000212984 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACATTTA TTCGACAGTA TACCGATGCC TCATATCCTG TTTTTCAGAA AGAGGAGTGC GTGGAGGATG CCGTGAAGCT TCTTCTGCAC TCCCGGCTGT ATGCTGCGCC TGTTCTTGAC GGTAAGCAAT TCCTTGCAAT GGCCAGCTTG CATGAACTGC AGGCAGGCCT CAACGAGGCA GAAGATTCTT CATCTCTGAA AGTTTCGCAC TTGCATTTCC GCTCATCGGT GGTTCTCGAT ATTCGTGAAC ATCTTCTGGA CTCGATCAGT CGCATTGCCG ATGATACCTT GCCGGTGATC GCCGTTACTG GAGACGATGG AGGTTATGAA GGGGTGGTGC TTCGCGATGA ACTTTTTCGT GATGTCGCAT CTGTTTTCAA TCTTCTTGGC GATGAGTTTA CGCTTGAGCT CGAGGTTCCC TCGATGGGCG TCAAGATTTC CGAGATCGTT CAATCCATAG AAAAGAACGA CGCAATGGTT CTCAGTTTCG GGGCCAGAGC ACCTGAACCC GATGCAGCGG GTATGGTTAT CACATTCAGA GTTCATACCT CATCTCTCTA CCGCCTTGTC AAGAATCTTG AGAAATACGG CTACCTGATA GGCTATCATT CACCCTATTC AGGCGAAGGG CGTGATGAGC TGCGCGACAA GGCTCTTGAG TTTATGCGCT ATATCGATAT GTAG
|
Protein sequence | MTFIRQYTDA SYPVFQKEEC VEDAVKLLLH SRLYAAPVLD GKQFLAMASL HELQAGLNEA EDSSSLKVSH LHFRSSVVLD IREHLLDSIS RIADDTLPVI AVTGDDGGYE GVVLRDELFR DVASVFNLLG DEFTLELEVP SMGVKISEIV QSIEKNDAMV LSFGARAPEP DAAGMVITFR VHTSSLYRLV KNLEKYGYLI GYHSPYSGEG RDELRDKALE FMRYIDM
|
| |