Gene Paes_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1040 
Symbol 
ID6459985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1142723 
End bp1143316 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content51% 
IMG OID642725040 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_002015726 
Protein GI194333866 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID[TIGR02727] 5,10-methenyltetrahydrofolate synthetase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000835341 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000130989 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAGCAG ATAGGGATTG GACGACAGAG AAGAGCGCCG TGCGTCGCAG AATGATTGCT 
CTGCGCAGTG CCCTTTCGCG CCATGACTGG GAATTGCGGA GTCGGGCACT AACGGCTAAG
CTCTTGTGTT TAGATAGTGT AGTGCGTGCA GAACAGGTGA TGATTTATCT GCCTTTCGTT
GCACGCAGGG AGGTGGATAC GTCCATGTTT ATGTCGTGGC TCGAGGCAGA GCAGAAAACA
GTTTCAGTTC CGGTAGTAAA GGGAAAAGAT CTTGTTGCTT CACGTTTTCA TGTTGGCGAC
AGGATTGTTT CCGGCTGTTT CGGCCAGCCT GAGCCGGCCA TTGTGCGCCC TTTGCCTGTC
GTGGCGGACG TTATCATTGT TCCTCTTGTT GCAGCAGACA GGTCCGGGAC CAGAATAGGG
TATGGTGCGG GTTGTTACGA CCGTTTTTTC GCTGCACTGC AGAAGCGGGG TTTTACTCCG
CATGCTGTTG GTATATGTTT CAGTTTTCAG GTTCTCGACA CCCTTCCGTT CGATCCCTGG
GACAGGAAAC TCGACTGTAT TGTGACAGAA CAGGAAGTGA TAAGCATTCA ATAA
 
Protein sequence
MRADRDWTTE KSAVRRRMIA LRSALSRHDW ELRSRALTAK LLCLDSVVRA EQVMIYLPFV 
ARREVDTSMF MSWLEAEQKT VSVPVVKGKD LVASRFHVGD RIVSGCFGQP EPAIVRPLPV
VADVIIVPLV AADRSGTRIG YGAGCYDRFF AALQKRGFTP HAVGICFSFQ VLDTLPFDPW
DRKLDCIVTE QEVISIQ