Gene Paes_1026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1026 
Symbol 
ID6460137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1128537 
End bp1129700 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content53% 
IMG OID642725025 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_002015712 
Protein GI194333852 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.297326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGGAG CAGAATTAAT CGGTCGTGAG GAACTGATGG AGATTCAGGA CCTTTTCGGG 
AAAGAGAGGG TCAATTTATA CCGTTACGGT CCCGGAAATT ATAAGACACG CGAGTTTGAG
GCTATGTTTG CTGAAGTGAT GGGCGTGAAG TATGCTCACG CGGTTTCATC AGGGACCGCT
GCTATTCACT GTGCCCTTGC TGGAGCAGGA ATCGGGCCCG GTGACGAGGT TATTATCACC
GCATGGACCT TTATCGCCCC TGTTGAGGCC ATCAGTGCAC TGGGCGCAAT TCCTGTGCCT
GTCGAGATCG ATGAAACCTT TCATCTCGAC CCCCTCGCGG TAGAAAGAGC GCTATCGTCA
AAAACAAAAG CTGTTGTCGC CATTCCTATG TGGGCGCCTC CTCAAATGGA CGAGCTGTCA
GCGTTGTGCG ATCGTCATGG GCTTGTGCTG ATAGAAGATG CTGCACAGGC GCTTGGTGCG
AGTTATCGCG GACGCAAGCT CGGTACGATC GGACAGGTCG GATCGTTTTC TTTTGATGCC
GGTAAAACGC TGCATACGGG AGAGGGAGGA ATGGTTATTA CCGATGATCG TGACATCTAT
GACCGTGTTG CTGAGTTTTC CGATCATGGT CATATGCATC TTGCCGGACT GGCGCGCGGC
AAAGACCCGA GACGGGCGAA AGGACTGAAT TACCGTATGA GTGAGTTGAC TGCTGCAGTC
GGCATCGCGC AGCTGCGTAA AATGGAGTGT ATACTCGAAC GCTCCAAGGC CAATAAACGA
AGGATCAAAG AGGGGCTTGC TGATCTTGCC GGACTGACGT TCCGCTCCTT CACCGATGAG
GACGGCGCCC AGGGCGATAC GCTTATTTTC AGTCTCGAGA AGAGGGAACT GGCTCTCAGG
TTTGAGCAGG AACTGCTTGC CAGAGGATTC GGGACAAAGA TTCTTCCCGA AGCACTCGAC
TGGCATTTTG CCGGCGTGTG GGGGCATCTT CTGCAACAGT ATGATCGATA TCGCGACTGT
GATCTCGAAT CGCTCTGGCC TGAAACCGGT ATGAAGCTGC GCCGCAGTAT CTGTCTTAAT
ATTCCGGTTT TGATGGATGA CGCAGCCATT GATGAGCTGG TCAGTGCGGT ACGGTCTGTC
GCTTTGAATG TGCTGGGAGC CTGA
 
Protein sequence
MPGAELIGRE ELMEIQDLFG KERVNLYRYG PGNYKTREFE AMFAEVMGVK YAHAVSSGTA 
AIHCALAGAG IGPGDEVIIT AWTFIAPVEA ISALGAIPVP VEIDETFHLD PLAVERALSS
KTKAVVAIPM WAPPQMDELS ALCDRHGLVL IEDAAQALGA SYRGRKLGTI GQVGSFSFDA
GKTLHTGEGG MVITDDRDIY DRVAEFSDHG HMHLAGLARG KDPRRAKGLN YRMSELTAAV
GIAQLRKMEC ILERSKANKR RIKEGLADLA GLTFRSFTDE DGAQGDTLIF SLEKRELALR
FEQELLARGF GTKILPEALD WHFAGVWGHL LQQYDRYRDC DLESLWPETG MKLRRSICLN
IPVLMDDAAI DELVSAVRSV ALNVLGA