| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_1017 |
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| Symbol | trmD |
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| ID | 6460242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 1119472 |
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| End bp | 1120185 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642725016 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_002015703 |
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| Protein GI | 194333843 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000229696 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.720031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCCTT TGCGGATAGA TGTTATTTCC GTCATGCCCG GATTTTTCGA ATCTCCGTTG
CAGAAAGGCC TCTTGCATAG AGCAACAGAG AAGCATCTGG CCGATATTCA TCTCCATAAT
CTGCACGATT ACGGGCTTGG CAGGTATAAG CAGGTTGATG ATACGCCTTT TGGCGGTGGT
GCCGGAATGG TTTTAAGGCC CGAGCCGGTG TTTGAATGCA TAGAAAAGCT TCTTGCGGAG
CGATCCTATG ATGCCGTTAT TTTCATGACT CCGGATGGTG AGCGTCTGGA GCAGCAGAGC
GCTAACCGGC TTTCGCGTCT GAAGAATCTT ATTATTCTCT GCGGGCATTA CAAGGCGGTT
GATCAGAGGG TCCGTGAGCG GCTGGTGACT ATGGATATTT CTGTGGGGGA CGTTGTCCTT
TCAGGGGGAG AAATTCCAGC CCTCATGCTC ATGGATTCCG TTATCAGGCT CATCCCCGGC
GTTCTTGGCG ACAGTGAGTC AGCCTTAACC GACTCGTTTC AGACAGGGAT GCTGGATTGC
GTTTATTATA CACGACCGTC GGAATACCGG GGAATAAAGG TTCCTGAGGT GCTTTTGTCG
GGTCATCATA AGAAAATAGA GGAGTGGCGG AACTGCAATG CGCTTGCCAG AACGCTTGAG
CGCCGACCGG ATCTTCTCGA TGAGGAAACT CTGGAAGAAT TAAAGAACAA ATAA
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| Protein sequence | MKPLRIDVIS VMPGFFESPL QKGLLHRATE KHLADIHLHN LHDYGLGRYK QVDDTPFGGG
AGMVLRPEPV FECIEKLLAE RSYDAVIFMT PDGERLEQQS ANRLSRLKNL IILCGHYKAV
DQRVRERLVT MDISVGDVVL SGGEIPALML MDSVIRLIPG VLGDSESALT DSFQTGMLDC
VYYTRPSEYR GIKVPEVLLS GHHKKIEEWR NCNALARTLE RRPDLLDEET LEELKNK
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