Gene Paes_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1002 
Symbol 
ID6458934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1104944 
End bp1106242 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content53% 
IMG OID642725001 
Productsodium:dicarboxylate symporter 
Protein accessionYP_002015688 
Protein GI194333828 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.541825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGAACA ACAAACTTCT CATTGGCATT CTTGCAGGAA TTCTCTCCGG TACGCTTATC 
GGAGGATTTT TTCCAGCCGT CGGCAACGAA ATCTCGTTTA TCGGAGACCT CTTCATACGA
ACACTTTCGA TGCTTGTCAT GCCACTCATT ATCGCGGCAA TGATAACCGG CATCAGCAGG
CTCGGGGACA TACGGAAGCT CGGCTCGCTG GGAAGAGTAA CCATCAGCTA CTACCTTGGC
ACCACCGCAG TCGCCGTTAT CACAGGAATA ACCCTGGTTG TTCTGCTCCA ACCCGGCAAC
CCCGGTATTG CAACGCCACC AACAGAACCG CCATCAGCAA TAACGGCAAC GCACAATGAA
TCCCTGATGG ACGAAGCACC GCAAACCCGA AGAGCACAAG AAGAAGAGCG CACCATCCAG
GGACTGCTCA AAGAGGTGAT TACCGGCCTT GTCCCATCAA ATCTTTTCAA GGCTATGGCG
GAAAATGATA TCCTGCCGAT CATTGTCTTT TCACTCCTCC TGGGAGGCGT TCTGACAACG
ATGGGAGAAC AAGGCCGACC GGTTCTGGAC TTTTTCGTCA GCCTCAACGA AGCAGTGATG
AAAATCATTC ACCTGATCAT GTATACCGCA CCTGTCGGAA TAGGGGCTCT TATTGCAGGA
CGACTGAGCA GCGCCGGAGG ATTTAACGGA TTCATCCCTG AACTCATGCG CCTCGGCAGC
TATTCGCTGA CTGTCATTGC CGGGCTCATG ATTCACAGCA TCATCGTCCT GCCTCTCCTC
CTGAAATTTA TCGGGAGAAC ACCTCCCGGA CGGTTCGCCG CCAACACCTC TCCTGCTCTC
CTGACAGCCT TTTCAACAGC CTCAAGCTCG GCAACGCTTC CGGTCACCAT GGAATGCGCC
GAAGAAAAAA ACAATGTCTC AGCCCGAACA GCAGGATTCA CGCTTCCCCT TGGAGCGACA
ATCAACATGG ACGGCACCGC TCTTTATGAA GCAGTTGCCG TTATATTTAT CGCCCAGATG
AACGGAATCA TACTGACGGG GCCGGAACTC GGCATCGTCT TTCTCACAGC AACACTTGCG
GCAATCGGAG CCGCGGGTAT TCCTGAAGCA GGGCTGGTCA CTATGGTTCT GGTCCTGAAA
GCGGTCAACC TTCCAGTGGA AGGCATTTCG CTCATTCTTG CTATAGACTG GTTCCTCGAC
CGTTGCAGGA CAATGGTCAA CGTATGGGGA GACAGTGTTG GGGCGAAGGT CATTGACCGC
TACCTTAACG GAAAAACAAG CCAGCACCTG AACAGGTGA
 
Protein sequence
MQNNKLLIGI LAGILSGTLI GGFFPAVGNE ISFIGDLFIR TLSMLVMPLI IAAMITGISR 
LGDIRKLGSL GRVTISYYLG TTAVAVITGI TLVVLLQPGN PGIATPPTEP PSAITATHNE
SLMDEAPQTR RAQEEERTIQ GLLKEVITGL VPSNLFKAMA ENDILPIIVF SLLLGGVLTT
MGEQGRPVLD FFVSLNEAVM KIIHLIMYTA PVGIGALIAG RLSSAGGFNG FIPELMRLGS
YSLTVIAGLM IHSIIVLPLL LKFIGRTPPG RFAANTSPAL LTAFSTASSS ATLPVTMECA
EEKNNVSART AGFTLPLGAT INMDGTALYE AVAVIFIAQM NGIILTGPEL GIVFLTATLA
AIGAAGIPEA GLVTMVLVLK AVNLPVEGIS LILAIDWFLD RCRTMVNVWG DSVGAKVIDR
YLNGKTSQHL NR