Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1002 |
Symbol | |
ID | 6458934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1104944 |
End bp | 1106242 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642725001 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_002015688 |
Protein GI | 194333828 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.541825 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAGAACA ACAAACTTCT CATTGGCATT CTTGCAGGAA TTCTCTCCGG TACGCTTATC GGAGGATTTT TTCCAGCCGT CGGCAACGAA ATCTCGTTTA TCGGAGACCT CTTCATACGA ACACTTTCGA TGCTTGTCAT GCCACTCATT ATCGCGGCAA TGATAACCGG CATCAGCAGG CTCGGGGACA TACGGAAGCT CGGCTCGCTG GGAAGAGTAA CCATCAGCTA CTACCTTGGC ACCACCGCAG TCGCCGTTAT CACAGGAATA ACCCTGGTTG TTCTGCTCCA ACCCGGCAAC CCCGGTATTG CAACGCCACC AACAGAACCG CCATCAGCAA TAACGGCAAC GCACAATGAA TCCCTGATGG ACGAAGCACC GCAAACCCGA AGAGCACAAG AAGAAGAGCG CACCATCCAG GGACTGCTCA AAGAGGTGAT TACCGGCCTT GTCCCATCAA ATCTTTTCAA GGCTATGGCG GAAAATGATA TCCTGCCGAT CATTGTCTTT TCACTCCTCC TGGGAGGCGT TCTGACAACG ATGGGAGAAC AAGGCCGACC GGTTCTGGAC TTTTTCGTCA GCCTCAACGA AGCAGTGATG AAAATCATTC ACCTGATCAT GTATACCGCA CCTGTCGGAA TAGGGGCTCT TATTGCAGGA CGACTGAGCA GCGCCGGAGG ATTTAACGGA TTCATCCCTG AACTCATGCG CCTCGGCAGC TATTCGCTGA CTGTCATTGC CGGGCTCATG ATTCACAGCA TCATCGTCCT GCCTCTCCTC CTGAAATTTA TCGGGAGAAC ACCTCCCGGA CGGTTCGCCG CCAACACCTC TCCTGCTCTC CTGACAGCCT TTTCAACAGC CTCAAGCTCG GCAACGCTTC CGGTCACCAT GGAATGCGCC GAAGAAAAAA ACAATGTCTC AGCCCGAACA GCAGGATTCA CGCTTCCCCT TGGAGCGACA ATCAACATGG ACGGCACCGC TCTTTATGAA GCAGTTGCCG TTATATTTAT CGCCCAGATG AACGGAATCA TACTGACGGG GCCGGAACTC GGCATCGTCT TTCTCACAGC AACACTTGCG GCAATCGGAG CCGCGGGTAT TCCTGAAGCA GGGCTGGTCA CTATGGTTCT GGTCCTGAAA GCGGTCAACC TTCCAGTGGA AGGCATTTCG CTCATTCTTG CTATAGACTG GTTCCTCGAC CGTTGCAGGA CAATGGTCAA CGTATGGGGA GACAGTGTTG GGGCGAAGGT CATTGACCGC TACCTTAACG GAAAAACAAG CCAGCACCTG AACAGGTGA
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Protein sequence | MQNNKLLIGI LAGILSGTLI GGFFPAVGNE ISFIGDLFIR TLSMLVMPLI IAAMITGISR LGDIRKLGSL GRVTISYYLG TTAVAVITGI TLVVLLQPGN PGIATPPTEP PSAITATHNE SLMDEAPQTR RAQEEERTIQ GLLKEVITGL VPSNLFKAMA ENDILPIIVF SLLLGGVLTT MGEQGRPVLD FFVSLNEAVM KIIHLIMYTA PVGIGALIAG RLSSAGGFNG FIPELMRLGS YSLTVIAGLM IHSIIVLPLL LKFIGRTPPG RFAANTSPAL LTAFSTASSS ATLPVTMECA EEKNNVSART AGFTLPLGAT INMDGTALYE AVAVIFIAQM NGIILTGPEL GIVFLTATLA AIGAAGIPEA GLVTMVLVLK AVNLPVEGIS LILAIDWFLD RCRTMVNVWG DSVGAKVIDR YLNGKTSQHL NR
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