| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0987 |
|---|
| Symbol | |
|---|
| ID | 6458716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 1085087 |
|---|
| End bp | 1085713 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642724986 |
|---|
| Product | DNA polymerase III, epsilon subunit |
|---|
| Protein accession | YP_002015673 |
|---|
| Protein GI | 194333813 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.750211 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAGA GGACATTGGC GGATAGTGTG GTGGTGCTGG ATTTCGAGAC GACGGGTTTG
TCGCCGCAGT ATGGCGATCG GGCTATCGAG ATCGGTGCGG TGCTTGTTGA AGAGGGGAGG
ATTGTCGACC GCTTTCAGAA GTTGATGAAT CCCGGTTTCC GTATCAGTTC GTTTATCGAG
GCCTATACAG GTATTACCAA TGAAATGCTG AAAGGAGAGG CCTGTTGTGA AGAGGTTATG
GCTCAGTTTT CGGAGTTTAT CGCTGGTCAC AATATTGTTG CGCACAATGC GTCATTCGAT
AAGCGTTTTC TGGATTTCGA GCTGAAACGG GCCAATCGAT CTTATGAGGG TGTCTGCTGT
TGCTCTCTGC TTGTTTCAAG ACGGATTTAT CAGGATTCTC CGAACCATAA GTTGCAGACA
TTGGTGTCAC ATGCAGGCGT TCCAACGATT GGCAGTTTTC ACCGTGCGCT GGCAGATGCT
GAGATGACTG CGCATTTGTG GTTGGCGATG ATCGATCGCA TTCGTAAGCA ATACGGGATC
CCGACGGTTT TCTTTGACCA ATTGAGTGAA CTGTCGAGAG TCGATAAACT CTATGCACAC
CGATACCTTA CCTCTCTGGC AGACTGA
|
|---|
| Protein sequence | MQKRTLADSV VVLDFETTGL SPQYGDRAIE IGAVLVEEGR IVDRFQKLMN PGFRISSFIE
AYTGITNEML KGEACCEEVM AQFSEFIAGH NIVAHNASFD KRFLDFELKR ANRSYEGVCC
CSLLVSRRIY QDSPNHKLQT LVSHAGVPTI GSFHRALADA EMTAHLWLAM IDRIRKQYGI
PTVFFDQLSE LSRVDKLYAH RYLTSLAD
|
|---|
| |