Gene Paes_0951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0951 
Symbol 
ID6460358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1047661 
End bp1048842 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content52% 
IMG OID642724954 
Productpentapeptide repeat protein 
Protein accessionYP_002015641 
Protein GI194333781 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.537357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCTGCG CGTTGATGTT TTTTTCCGTG CCTTCTCTGG GATATGATCG TCTGCAGTTC 
GAAACCCTTC AGAAAGGGGT GGAGGAGTGG AACCGTGTTC GAGCCGAATC GGGCCAGGAG
CCTGTCGATC TGTCGGAAGC GGTTCTGAAA GGAAAAAACC TCAATGGTGT GAATTTTCGG
GGGGCAGTTC TGCGGGGAGC GGATTTTGAA AGTTCCAATC TCAGCAATGC CTGTCTTGAC
GGGGCCGATC TTACCGGCGC GCGTTTGTTT CAGACGTGTG CTGCAGGTGC TTCTTTTCGC
GATGCGCTCT GCAAAGATGC CCTTATGGAA GAGGCTCTCT GCTCAGATGC CGATTTCAGA
AATGCTGTGC TCGACGGGTC TGTCATCAAA CAGGCTGACT TTTCGGAATC GATTCTCAAC
GGGGCGAGTC TTCGTGATGT CGATCTTCGT TCGACCGATC TTCGTCATGC CGATCTGAGC
AATGCCGATC TTTCGGGAGC ATATCTCTGG AAAGCCGATA TCAGTTTCGC CGGCTTTGAC
AATACGGTTA TTTCGAACCG AACCGTCGTA GAATCCGGCT CAAACGGGAC CCCGCAATGG
GCGGAGAAAC ATCATGCCCG CTACGTGCAT GAAGAGCCTG CAGTCTCCTT CCAGGAGTTA
TCCATCGACC GCTCACGGAC GTTGCTTGAT AAAGAGCTTC CTGTCAATAC TGTGGCGCAG
AAAATCTTGT TTGGCCAACG TCTCGATAAG GCCGATGAGC TCTCTTACGA TGTTTTTCAA
TTCAAGCTGT TGAAAAAAAA TATAACCGAA TGGAATTCGA TGAGGCAAGC TCAGCCCGAA
ACCCCTATAC GGCTTTCATC GGCTGACCTC AGCAGAAAGG TTCTTGACAG CGCAGACTTG
CACGATGCCG ATCTTTCCCG TGCACTTCTG AAGGGTACCG ATCTGGTCGA TGCCGATCTC
AGGGGGGCAG ACCTTTCCGG ATGTAATTTG CGTCAAGCCG ATCTTACTCA TGCCGATCTC
AGTGGGGCGG ATCTCAGGGG CGCTTACCTC TGGAGAGCCA ATTGCAGTTG GACTGTCTTT
GCAAACGCGA TTGTCGATGC TTCGACAATT CTTGATACCG GCCGTCATGC GACAGCCGGG
TGGGCAGAAA TGAATGGAGC TGTCTATCGT GAATCGAATT GA
 
Protein sequence
MCCALMFFSV PSLGYDRLQF ETLQKGVEEW NRVRAESGQE PVDLSEAVLK GKNLNGVNFR 
GAVLRGADFE SSNLSNACLD GADLTGARLF QTCAAGASFR DALCKDALME EALCSDADFR
NAVLDGSVIK QADFSESILN GASLRDVDLR STDLRHADLS NADLSGAYLW KADISFAGFD
NTVISNRTVV ESGSNGTPQW AEKHHARYVH EEPAVSFQEL SIDRSRTLLD KELPVNTVAQ
KILFGQRLDK ADELSYDVFQ FKLLKKNITE WNSMRQAQPE TPIRLSSADL SRKVLDSADL
HDADLSRALL KGTDLVDADL RGADLSGCNL RQADLTHADL SGADLRGAYL WRANCSWTVF
ANAIVDASTI LDTGRHATAG WAEMNGAVYR ESN