| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0887 |
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| Symbol | |
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| ID | 6458615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 969329 |
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| End bp | 973348 |
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| Gene Length | 4020 bp |
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| Protein Length | 1339 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642724890 |
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| Product | Tetratricopeptide domain protein |
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| Protein accession | YP_002015577 |
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| Protein GI | 194333717 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.102317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGTA CTGAACTAGG AATACTATTT GAAAAAGCTG CAGTCTGCAT TTTGAAGGAG
GTTTTTCAGT GCTGGGGCTA TGATGTCACG AACTCAAAAA TCCAACGCTC AGGTACGCAA
TACGGTTTCG ATTTGTATTT TAAAATCGTC AAAGGCTTGG TTACTCATAA TTTGTTTATA
GAGTGCAAAG CATCCAATAG TTTCAATGAA ATAAAACAAG CCGAACTGAA CGATAAAATT
GCGCAGCTGA ATTGGGCAGG CTTTCCTCGT AAGGACTTTC ACATTTTCTT TTCGCCAACT
CGTGCCGTAG ACTACAACAA CCAACAACTG AGCATTGAAA ACAACGACTG GCCTTTTGTC
GTCGTAGATT GGATGCGCAA ACAAGGTGAA ACGAGCCCTG TTCTAGAATT GTTCGCTGCT
TATAAAGGGG ATGATGCCGA CATATCTTCT TATGCAGGCC ACCTTTTTTC TAAAGAAATT
GCTCCAGACT TCACAACTAC CAAAACTTTC ACCCAAGTCT GCGATGAGCT GAAGTCTCAT
TTGGAGCGGC GCATCGACGA ACATAATGAT GTCGCAGATC AAGTTGATTA TCGCATTATC
AATGGTACTT TTTGGAGCCG GGTGCAACAG AATACGCATC AGGAATCTCT GCATTATTAC
TACACTCGTA CAGACTCCTC TCCTGCTAGG TTGAGGGAGA TCGTTGCTAA TGATTACGAT
GTTAGGCATG AGAGGCTGGA AAAAGAATTT GACCAGACGC TTCGCCAAGC TATCGCGCAG
AAATCGGCGA TAATTAAAAT CCTCTCCAGA GGCGGGGAAG GAAAATCCAC GTTTCTTTGT
CGCATTGCCA AGAAGTTCTG CAATCAACAC ACAGTTATTT GGCTGGATAC CCTGGATTGC
CTGACAGGCA TCAAACAGAA AATTAAGCGT CTCGAGATGG AAGGTGCACT GATTCTTCTG
CTCGACAACG CCGCAATCTA TGGGAGAGAA TTGGCAGACT TTGCCCAAAA ACTTAACTCC
CAGTTCAGAA AATATTCGCT GGTTCTTGTG GTGGCGGAGA GGGAATTTCG CTATTTGAAT
ATTGAAGGGA AGGAGCTTCT GGAGTGGTCC TTTACCGAAT CCCACACCAT CGAATACCGT
TCTGGTCGGC TCAAAAAACC CATATTCGAA CGGTTCATAG CAAATATTCA GTGCGGTCAA
CTTCTTCCCA CAGAAATAAT AAAAGAGGCA CAAAGGATAT TTCTTGCCGA CATACGCATG
AGCGTCTCGG AATCCATATT CGCTGCCATC AAATACCTAA AGGAACATGC TGGACTTAGA
GGATATGTTT TCGACTGGGA AGACTGGGCG AATTTCGCAA GATTTAAAAT GCCTGGGCTT
GAGCGGCTCT ACCTGATCCT CGCCACCTTC TATCAATTTG GCTATAGCCT TGATGTCGGT
TTCTGTACTT GTTTTCTGAA AGGTGCGGAT GCACTTGATA TTAATACGGC CCTGAACCAG
AATCCCAACC TGCCGATCTA TCGCCGTGGC CGCCATCTGT TTCTCCGGCA TGAAACGCTG
GCCGCATGGT TCCTTGATGA GAAAGAAGCA TGGGGGCACA CCAATCAAGC AAACTCCGAA
CTGCTCTTTC ATGCATTTCT GAGAAACATC AATGCACCCG TCGCGCGCGA TCTTTTCATC
TGGGTTTGTA TCAAGAATAA AGATTTTCGC CGTTCCTTCC TCGCGAGAAT GGTGGACAAC
GAGAAGCGCA TGGAGGTGCT GAAAGGCTAT ATTCAGCAAA ATCCTGGAGA ATTAAAGTGC
CGCACGGAAC TGAGCAAAAT CTACCAGCAG CAGAAGAAGT GGAAAGAGGC GGGAGACATC
TTGCTGGATT TAAAACGGCT CGATCCGGAT AACCTCCAGG CTCGCACGGA ACTGAGCAAA
ATCTACCAGC AGCAGAAGAA GTGGAAAGAG GCGGGAGACA TCTTGCTGGA TTTAAAACGG
CTCGATCCGG ATAACCTCCA GGCTCGCACG GAACTGAGCA AAATCTACCA GCAGCAGAAG
AAGTGGAAAG AGGCGGGAGA CATCTTGCTG GATTTAAAAC GGCTCGATCC GGATAACCTC
CAGGCTCGCA CGGAACTGAG CAAAATCTAC CAGCAGCAGA AGAAGTGGAA AGAGGCGGGA
GACATCTTGC TGGATTTAAA ACGGCTCGAT CCGGATAACC TCCAGGCTCG CACGGAACTG
AGCAAAATCT ACCAGCAGCA GAAGAAGTGG AAAGAGGCGG AAGACATCTT GCTGGAGGAA
ATAAAAATCG CTCCTGATGC TCTCCATCCG CGCACGGAAC TGAGCAAAAT CTACCAGCAG
CAGAAGAAGT GGAAAGAGGC GAAAGACATC TTGCTGGATT TAAAACGGCT CGATCCGGAT
AACCTCCAGG CTCGCACGGA ACTGAGCAAA ATCTACCAGC AGCAGAAGAA GTGGAAAGAG
GCGGAAGACA TCTTGCTGGA GGAAATAAAA ATCGCTCCTG ATGCTCTCCA TCCGCGCACG
GAACTGAGCA AAATCTACCA GCAGCAGAAG AAGTGGAAAA AGGCGGAAGA CATCTTGCTG
GAGGAAATAA AAATCGCTCC TGATGCTCTC CATCCGCGCA CGGAACTGAG CAAAATCTAC
CAGCAGCAGA AGAAGTGGAA AGAGGCGGAA GACATCTTGC TGGAGTCTCT ATATATTGAT
GCCGAGCAAC TCCATCCGCG CACGGAACTG AGCAAAATCT ACCAGCAGCA GAAGAAGTGG
AAAGAGGCGG AAGACATCTT GCTGGAGTCT CTATATATTG ATGCCGAGCA ACTCCATCCG
CGCACGGAAC TGAGCAAAAT CTACCAGCAG CAGAAGAAGT GGAAAGAGGC GGAAGACATC
TTGCTGGAGT CTCTATATAT TGATGCCGAG CAACTCCATC CGCGCACGGA ACTGAGCAAA
ATCTACCAGC AGCAGAAGAA GTGGAAAAAG GCGGAAGACA TCTTGCTGGA GGAAATAAAA
ATCGCTCCTG ATGCTCTCCA TCCGCGCACG GAACTGAGCA AAATCTACCA GCAGCAGAAG
AAGTGGAAAG AGGCGGAAGA CATCTTGCTG GAGTCTCTAT ATATTGATGC CGAGCAACTC
CATCCGCGCA CGGAACTGAG CAAAATCTAC CAGCAGCAGA AGAAGTGGAA GGAGGCGGAA
GACATCCTGC TGGAGGCCCT GGCCATTGAT TCTGAAGACC TCAAATCGCT GACGGAACTT
TATATCGTTT ACAGAAATAC TGGCAGGTCG GAGCATGGAG AGACGCTGTT GCTCAAGTGT
TTGTCCATCA ATCCATACGA CTTGAATTCA TTGCTTGAGA TGGGAAAGCT TTGTGCCATG
CAGCCAACGC GTAGAGAGGA AGCCGAGAAT TATTTCAAGA GGCTCTTACT GACTGATCCG
GAGAATCTTC ACGCAAAAAC AGAATTGGCC TCATTATATG CCAGGATGCG AAAATGGCCG
AAACGTGAAA AAATACTGTT CGAGATTTAC AAAAAAGGCA AAGCTGACAC ATTCATATTA
AAAGATCTCG CTCAGGTTTT TCAGCGCTTC AAGAAATACC GTATCGCGAT CAAGCTCTTG
GAGCGAGCAC TTGCTCTCTG GGCCGACAAC CTGCTTCTAA TGGCTGACCT GATGGATATA
TATGCCATGT TGTCTGACTG GAATAATTTT TATGTTTGGC ACGACCGGGC CACAAAAATC
ATGAGCAAGA ATCTCCATCA TAAAAATATT GATCGATTTC GGCAGCGAAT GGAACGGATT
AACTTGAGCC AGAATGACGC ACACGAACTT GTTTCACTCT ATAAGAAAGG CGTAATGGGC
CAAGATTTTG TTGAATACGG CAATGACCGT TTTTGCCTCC GTGAAGGAAG TGTAGTCAAC
TATAGGTTGA AACCAGGCAA CAAGGTCTAT TTCGCACTTT ATGGTAACAA CGAGGAGATG
CTGGCAGATT TCATTGAGCC CTATTTCGAA GACATTGAGG ATTTATATAA ATTGAAATAG
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| Protein sequence | MQSTELGILF EKAAVCILKE VFQCWGYDVT NSKIQRSGTQ YGFDLYFKIV KGLVTHNLFI
ECKASNSFNE IKQAELNDKI AQLNWAGFPR KDFHIFFSPT RAVDYNNQQL SIENNDWPFV
VVDWMRKQGE TSPVLELFAA YKGDDADISS YAGHLFSKEI APDFTTTKTF TQVCDELKSH
LERRIDEHND VADQVDYRII NGTFWSRVQQ NTHQESLHYY YTRTDSSPAR LREIVANDYD
VRHERLEKEF DQTLRQAIAQ KSAIIKILSR GGEGKSTFLC RIAKKFCNQH TVIWLDTLDC
LTGIKQKIKR LEMEGALILL LDNAAIYGRE LADFAQKLNS QFRKYSLVLV VAEREFRYLN
IEGKELLEWS FTESHTIEYR SGRLKKPIFE RFIANIQCGQ LLPTEIIKEA QRIFLADIRM
SVSESIFAAI KYLKEHAGLR GYVFDWEDWA NFARFKMPGL ERLYLILATF YQFGYSLDVG
FCTCFLKGAD ALDINTALNQ NPNLPIYRRG RHLFLRHETL AAWFLDEKEA WGHTNQANSE
LLFHAFLRNI NAPVARDLFI WVCIKNKDFR RSFLARMVDN EKRMEVLKGY IQQNPGELKC
RTELSKIYQQ QKKWKEAGDI LLDLKRLDPD NLQARTELSK IYQQQKKWKE AGDILLDLKR
LDPDNLQART ELSKIYQQQK KWKEAGDILL DLKRLDPDNL QARTELSKIY QQQKKWKEAG
DILLDLKRLD PDNLQARTEL SKIYQQQKKW KEAEDILLEE IKIAPDALHP RTELSKIYQQ
QKKWKEAKDI LLDLKRLDPD NLQARTELSK IYQQQKKWKE AEDILLEEIK IAPDALHPRT
ELSKIYQQQK KWKKAEDILL EEIKIAPDAL HPRTELSKIY QQQKKWKEAE DILLESLYID
AEQLHPRTEL SKIYQQQKKW KEAEDILLES LYIDAEQLHP RTELSKIYQQ QKKWKEAEDI
LLESLYIDAE QLHPRTELSK IYQQQKKWKK AEDILLEEIK IAPDALHPRT ELSKIYQQQK
KWKEAEDILL ESLYIDAEQL HPRTELSKIY QQQKKWKEAE DILLEALAID SEDLKSLTEL
YIVYRNTGRS EHGETLLLKC LSINPYDLNS LLEMGKLCAM QPTRREEAEN YFKRLLLTDP
ENLHAKTELA SLYARMRKWP KREKILFEIY KKGKADTFIL KDLAQVFQRF KKYRIAIKLL
ERALALWADN LLLMADLMDI YAMLSDWNNF YVWHDRATKI MSKNLHHKNI DRFRQRMERI
NLSQNDAHEL VSLYKKGVMG QDFVEYGNDR FCLREGSVVN YRLKPGNKVY FALYGNNEEM
LADFIEPYFE DIEDLYKLK
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