Gene Paes_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0872 
Symbol 
ID6460717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp950552 
End bp951313 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content49% 
IMG OID642724875 
Productband 7 protein 
Protein accessionYP_002015564 
Protein GI194333704 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000276466 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0470054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGTC TTAACCTGAT TCCGCTACTG TTTCTGCTTG TGGCGTTTCT GGCTTCCTCA 
GTCAAAATTC TCAGGGAGTA CGAGCGTGCC GTGGTATTTC GCCTTGGAAG GATTATCGGA
GCCAAAGGGC CGGGTATCAT CATTCTTCTT CCCGTGATCG ACAAGATGGT ACGTATCGAT
ATGCGAACGG TGACACTCGA TGTGCCTCCG CAGGACATTA TTACCAAGGA TAATGTGACC
GTGAAAGTCA GTGCTGTTGT GTATTTCAGG GTTATCGATT CGATCAAGGC GATTGTCGAT
GTCGAGGATT TTTATTTTGC GACTTCTCAG CTTGCTCAGA CCACGCTTCG CAGTACGTGT
GGTCAGGGTG AACTCGATCA TCTGCTTTCC GAACGAGACG AGATCAACGA GCAGATTCAG
AGTATTCTCG ATAAAGATAC CGCACCGTGG GGCGTCAAAG TCAGCAAGGT GGAGATCAAG
GAGATCGACC TTCCGATAGA GATGCAGCGC GCAATGGCTA AACAGGCTGA AGCAGAAAGA
GAGCGTCGAT CGAAAATCAT CAATGCCGAG GGTGAGTTTC AGGCCGCTCA GCGCCTGAGT
GAGGCTGCTG AGATTATTTC CCATAATCCG GGAGCCCTTC AGTTGCGTTA CCTGCAGACC
CTGCAGGATA TCGCCGGCGA GAATAATTCA ACGACGATTT TCCCGATTCC TATTGATCTG
TTCAAGCCGT TTATCGATAA CATGAAAACA GACAAGTCAT GA
 
Protein sequence
MFSLNLIPLL FLLVAFLASS VKILREYERA VVFRLGRIIG AKGPGIIILL PVIDKMVRID 
MRTVTLDVPP QDIITKDNVT VKVSAVVYFR VIDSIKAIVD VEDFYFATSQ LAQTTLRSTC
GQGELDHLLS ERDEINEQIQ SILDKDTAPW GVKVSKVEIK EIDLPIEMQR AMAKQAEAER
ERRSKIINAE GEFQAAQRLS EAAEIISHNP GALQLRYLQT LQDIAGENNS TTIFPIPIDL
FKPFIDNMKT DKS